Pempheris klunzingeri: 139217119
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Entry
139217119 CDS
T11454
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pklu Pempheris klunzingeri
Pathway
pklu04514
Cell adhesion molecule (CAM) interaction
pklu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139217119 (lrrc4ba)
04517 IgSF CAM signaling
139217119 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pklu04515
]
139217119 (lrrc4ba)
Cell adhesion molecules [BR:
pklu04515
]
Immunoglobulin superfamily
NGL family
139217119 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
139217119
NCBI-ProteinID:
XP_070704506
LinkDB
All DBs
Position
17:complement(4296102..4301242)
Genome browser
AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVALRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDEESALVAINETFIRVHPGP
TPSGHLWPEGVSTTASSLSTGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGASASGRGSGISGGSTMT
QSGASGLGGGQSLRLHHPEIVNLPNLARSDHLNHYYKSHHFNNNMMGLGMGTGSGVGLNN
NNNPSPCSQNTSISCSQVPTSTSGGTPTGGTLPSPVPLPPLGLHSSLKGLMGKSQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtgggagccgcctcctcctgc
ccctccctctgcacctgctctaaccaggccagccgagtcatctgcaccaggcaaaacctg
gaggaggtgcccgagagcatatcagtcaacacacgatacctcaacctgcaggagaactcg
atacaggttatcaagtcagacactttcaagcacttgaggcaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acactggagctgttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctccgggagctgtggctgcgcaacaaccctattgagactctgccagcctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctccgatgcagcctttgtgggccttatcaatctacgatacctgaacttgggtatgtgt
gggctgaaggacattcccaaactgacagcccttgtgcgtttggaggagctggagctgtca
ggaaaccggctggagattatccgacctggttctttccagggcctggtggctcttcgcaag
ctgtggctcatgcactcacaggtgtccgtcattgagcgcaatgccttcgatgacctaaaa
aacctggaagagctcaacctgtcccataactcactgcactccttgcctcatgacctcttc
acgcctcttcaccagctggagagggtacaccttaatcacaacccctggatctgcaactgt
gatgtgctttggcttagttggtggttgaaagagacggtgcccagcaacaccacctgctgt
gcccgctgccatgctcccccattcttaaagggcaagtacattggagagcttgaccagagc
cacttcacctgctatgcgcctgtcattgtagagccaccgacagacctcaatgtcactgag
ggtatggctgctgagctcaagtgtcgtacaagcacctccacaacatctgtcaactggatc
acccctaatggcactttaatgacacatggctcttaccgggtgcggatatccgtcctgcat
gatggcacactcaacttcacaaatgtcactctgcgtgacacaggccagtacacctgcatg
gtcaccaatgctgctggcaataccacagcaactgctgtcctcaatgtcactgctgctgat
gccagtgtcaactacacctactttacaaccgttaccgtggaaacagtggagaccccagga
gatgaagagtctgccttggtagccatcaatgagaccttcatccgtgttcaccctggcccg
actccctcgggccacctgtggccagaaggtgtctctaccacagcctcctctctgtcaacc
ggctggtcctcctcctctcctcgggccaccagacccaccttcactgtgcccatcactgag
ccaggcttctcaggcctggatgatgtgatgaagaccaccaagatcatcattggctgcttt
gtagccattaccttcatggcagcagtgatgctggtggtgttctataagttaagaaagcag
caccagctgcataaacaccacggcccggctcgtgccatcgagatcatcaatgtggaggat
gagctgggggccagtgccagtggtcggggcagcggtatctcaggaggctccaccatgacg
cagagtggagccagtgggttaggagggggccaaagccttaggctgcaccacccagagata
gtcaacctaccaaacctggcccgatcggaccacctcaaccactactacaaatcccatcac
ttcaacaacaacatgatgggcctgggcatgggcacgggttctggtgtgggcctcaacaac
aacaacaacccctcgccttgctctcagaacacgtccatatcctgttcccaggttccaacc
tccaccagtggaggaacgcccacaggtggcaccctgccctcccctgtgcccctgcccccg
ttgggtctccacagttctctgaaaggccttatggggaaaagccagaatgagcccctgctt
tttaagagtggctccaaggaaaatgtgcaagagactcaaatttga
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