Pempheris klunzingeri: 139217462
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Entry
139217462 CDS
T11454
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pklu Pempheris klunzingeri
Pathway
pklu04140
Autophagy - animal
pklu04142
Lysosome biogenesis
pklu04145
Phagocytosis
pklu04148
Efferocytosis
pklu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
139217462 (vps18)
04142 Lysosome biogenesis
139217462 (vps18)
04140 Autophagy - animal
139217462 (vps18)
04148 Efferocytosis
139217462 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139217462 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pklu04131
]
139217462 (vps18)
Membrane trafficking [BR:
pklu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139217462 (vps18)
Hops complex
139217462 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
aq_1631
zf-RING_11
zf_RING_Vps8
zf-RING_2
zf-RING_16
zf-RING_UBOX
RBSN_mid
zf-RING_5
zf-RING_Vps41
DUF1664
zf-rbx1
zf-ANAPC11
zf-C3H2C3
DUF4446
Apolipoprotein
LETM1_C
Motif
Other DBs
NCBI-GeneID:
139217462
NCBI-ProteinID:
XP_070704866
LinkDB
All DBs
Position
18:complement(8047236..8053230)
Genome browser
AA seq
981 aa
AA seq
DB search
MASILDEYEDSQNTRQSAQQHSRLSTNIGITHSGFVNVRLEEEKPIFNKQRIDFTPPEKI
NHLAVCNNQLCMSLGKDTLLRIDLAKPDQLNQIELGRKDESKVHKLFLDPSGSHLLISLN
TSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETNTGPILVGTSQGIIFEAEISAT
EGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGKVAE
GSEQQGFSSIFSQNQDLLPSFREFPANMGYSEITFYTSKLRSSPKAFAWMMGNGVLYGQL
DYVRPDSLLSDVQVWEYTPDIDLSVNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYED
VFPDKFGTLKKMIKDPVGGLVWIYTERAVFRYHVQREARDVWQMYMSMNKFDLAKEYCRE
RPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKKL
NNLKQNERTQITLLVTWLAELYLNRLGQLESDGNSIIFQETRDEFRHFLSNSKHKECLFN
NRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALDVLSKHCDQKLFYKF
SPVLMQHIPIKVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQINETIRYMEFCVYELNV
TEEAIHNYLLSLYAKYKSDSLLLYLAQAGTHASEIHYDLKYALRLCAEHGYLRACVLVYR
IMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLS
SCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKRIREDIQ
EMRNKYGVVDSHEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLAVFKQSRLEEL
QKKLAATTQSSKSRHRPVPKDEGDTSSLGKGNAGTSREQIKSDIDDIIASECVYCGELMI
KSIDKPFIDPKKFEEEKSSWL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattcttgacgagtacgaggattcgcaaaacaccaggcaaagtgcgcaacag
cacagccgcctgtcaaccaacatcggtataacacattcagggtttgtgaacgtgagactt
gaagaagagaagccgatattcaacaagcagaggattgacttcacaccgcctgagaagata
aaccatcttgcagtctgcaacaatcagctgtgcatgagtctgggaaaggacaccctgctg
aggattgacctggccaagccagatcagctaaatcagattgaattaggaaggaaagatgaa
agtaaagtccacaaactgttcctggacccctctggctcccatctgctgatcagcctgaac
accagcgagtgtctgtacctcaacaggaacacacagaaggtgcgcagtctgtcccgctgg
agaggccacctcatcgagagcgtaggctggaacaagctgctgggcaatgagaccaacaca
ggaccaatcctggttggcaccagtcaaggcatcatctttgaggctgagatctctgcaact
gagggcagcctgttcaacaccaatccagatcaatacttcagacaggtccattccctggag
gaagatgggaagcctgcaccggtctgctgcctggaggtggagcggggcctggagaacaag
tacttcatcatcgccaccacccgcaaacgcctgttccagtttgtgggtaaggtggccgag
gggtcagagcagcaaggcttcagctccatcttcagccagaaccaggacctgctgcccagt
ttccgagaattcccagccaacatgggctacagtgagattaccttctacacatcgaagctt
cgcagctcccctaaggcgttcgcctggatgatgggtaatggagttctgtatggtcagctg
gactatgtcagacctgattccctgctgagtgatgtgcaggtttgggagtacactccagac
atagacctcagtgtcaacaagcccatctccattgtcctgacacagttccacttcctgctg
ctgctccatgaccgagtcaaggccatctgcactctgaatggacaggtggtatatgaggat
gtgttccctgataaatttggcacccttaagaagatgatcaaggacccagttggtgggttg
gtgtggatctacactgagcgggcagttttccggtaccacgtccagcgcgaggccagggat
gtctggcagatgtacatgagcatgaataaatttgatctggccaaggagtactgccgtgaa
aggccagagtgtatggacatggtgctggccaaggaggctgagcactgcttccagaacaag
cggtaccttgagagtgctaaatgctacgcgctgacacagaactactttgaagagattgcc
ctcaagttcattgaagccaaacaagaggaagccctaaaggagttcttactgaagaaacta
aataatttgaagcagaatgagagaacgcagatcaccttgctagtcacctggctagctgag
ctctacctaaaccggcttggccagctggagagtgatggcaacagcatcatcttccaggag
acccgtgacgagtttcgccacttcctcagcaactctaaacataaggagtgccttttcaac
aaccgcagcaccatctacgacctgctggccagccacggcaacgtggacgacatggtttac
ttctcagtcgtcatgcaggactacgagagagtgatatcccactactgccaacatgacgac
tacagtgccgctctggatgtgctctccaagcattgtgatcagaagctattctacaagttc
tcccccgtcctcatgcagcatattcccataaaagtggtagatgcgtggattcagatggga
aaacggctggacccaaagaagctcattccagctctgatgaactacagccagatgggcagc
acccagcagatcaatgaaaccatccgttacatggagttctgcgtgtacgagttgaatgtg
acagaggaggccatccataactacctgctctcgctctacgccaagtataagtcggactct
ctgctgttgtatctagcgcaggcaggcacacacgcctcagagatccactatgacttaaag
tacgccctcaggctgtgtgcagaacatggctacctgcgggcctgtgtcctggtctacagg
ataatggaactgtatgaggaggcagtggatcttgctttacaagtagatgtagacttggcc
aagtcatgtgcagatctgcctgaggatgacgaggagctcaggaaaaagctttggctgaag
atcgcccggcatgtggtgcaggaggaaaaggatgtgaagaaagccatgaactgtctgtcc
agctgcaacctgctcaagattgaagacatcctgcccttcttcccagactttgtcaccatt
gaccattttaaggaggctatctgcagctccctggaggagtacaacaaacacatcgaggag
ctgaaacaagaaatggaggaggccacagagagcgctaaacgcatcagagaagacatccag
gagatgaggaacaagtatggtgtggtggattcccatgaaaagtgtgctgcttgtgacttt
ccattgctcaacaggcccttctatctgttcctgtgtggacacatgttccactacgactgc
cttttccaggaagtgacccctcacctagccgtctttaagcagagtcgtctggaggagctg
cagaaaaagctggctgcaaccacacaatcgtccaagtcacgccaccgcccggtgcccaag
gacgaaggagacacttccagcctgggaaagggcaacgccggcacaagccgcgaacaaata
aaatcagacattgatgacatcattgcgtctgaatgcgtgtactgcggcgaattgatgatt
aagtccatcgacaagcctttcatcgatccgaagaaatttgaggaggagaaatccagctgg
ctatga
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integrated database retrieval system
