Pempheris klunzingeri: 139217601
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Entry
139217601 CDS
T11454
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pklu03021
]
139217601 (taf1b)
Transcription machinery [BR:
pklu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
139217601 (taf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139217601
NCBI-ProteinID:
XP_070705064
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Position
18:632976..640462
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AA seq
637 aa
AA seq
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MDEEETAGYREPCALCSAVDWGVSDEGRFYCRSCHNVIERTREVVDPTTILQGSSRVSVI
SKGTGSKRPERGRQWRICEGFQFILRSQADALLRLGVRPHFKDDVLCQLWRLYLQKSRHA
FTHKPERSSKLKLRRTDSDSESAAASSAVSASETDPSGAAGSNAEASSDWSLCSGSVDAA
SYLSPQLRRRRNVTSMKTTLALIHLALTWSREALTLSDLLRLVNEGHVPFVNASEELPEE
MKLEGKDVLLFKVESVPSHPAVHREAQSLVLFLELPAFPPISRQSLLHPALLSLRYLTDL
NLPDELHPWVCRLMERAGMADHTLHTLDRSSRPVLPRYDVQTAALIVVTMKVIFGLDDHT
ECFVSFRELSNEAGAQDDTGTMFSLRRWYRLLQAALTRARRRRDQDLARKQWRAKKPFYP
NMKKKCVVIKKKRIAEQVQICFEKLSRRPAGVERAPPSSFRFCWGEEDGADGPSLHQKKL
DRVVTPKRDVLTPSNATYWHPALRPCRPQKCKSHYSEVEATLPRTFVWLLQLFCFLLDVK
PAYLYEEVLRVERRVIGKKTPKRRRTPSRSRSRSRSRSRSSSSSSSRSRSRTRSSSRTRS
SSSSSSRSSSRSSSRSSSRSSSRTRSRKPQRETGGPR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagaaacggctgggtacagggagccctgtgctctgtgctcggcggtggat
tggggagtctcagacgagggtcgtttctactgcagatcctgtcacaacgtcatcgagaga
accagagaggtggtggaccccaccaccatcctccagggctcctccagggtctccgtcatc
agcaagggaaccggatccaagaggcccgagcgagggcgtcagtggaggatctgtgagggt
ttccagttcatcctgaggagccaggccgacgctctgctcaggctgggggtccgtccacac
tttaaggacgacgtgctctgtcagctgtggagactttacctgcagaagagtcgacatgcg
ttcacccacaagccggagagaagctccaagttaaaactgcgccgtacggactcggactcg
gagagcgctgctgcgtcgtctgccgtgtcggccagtgagacggacccgtccggcgctgcc
gggtccaacgcagaggcctccagtgattggtcgctgtgttcgggctccgtggacgctgcc
agctacctgtcgccgcagctgaggcggcgccgcaacgtcacaagcatgaagacgaccctg
gctctgatccacctcgctctgacctggagccgtgaggcgctgacgctcagcgacctgctc
aggctggtgaacgagggccacgtcccgttcgtgaacgcctctgaggaacttcctgaggag
atgaagctcgaaggcaaagacgtcctcctcttcaaggtggagagcgtcccgtcccacccg
gcggtccaccgggaggctcagtctctcgtcctcttcctggagcttcctgcttttcctcca
atcagtcgtcagagtctgctgcacccggcgctgctcagcctgcgctacctgaccgacctg
aatctgcccgacgagctccacccgtgggtgtgcaggctgatggagcgcgccggcatggcc
gatcacacgctccacacgctcgaccgctcgtcccgacccgtcctgccacggtacgacgtg
cagaccgccgccctcatcgtcgtcaccatgaaggtcatcttcggcctggacgaccacacc
gagtgttttgtgtcttttagggaattatccaatgaggcgggagcgcaggacgacacaggg
accatgtttagcctgaggaggtggtaccggctgctgcaggccgctctgacccgagctcgg
cgccggagagatcaggacctcgccaggaaacagtggagggccaagaaacctttttacccc
aacatgaagaagaaatgtgttgtgattaagaagaaaagaatagccgagcaggttcagatc
tgctttgagaagctgtccagacgtccggcgggcgtcgagcgcgcccccccctcgagcttc
aggttctgctggggggaagaggacggcgccgacggccccagtctgcaccagaagaagctg
gaccgagtcgtgaccccgaagcgcgacgtcctgaccccctcgaacgccacatactggcac
ccggcgctccgaccctgccggccgcagaaatgcaagagtcattactcggaggtggaggcg
acgctgcctcgcaccttcgtctggctgctgcagctcttctgcttcctgctggacgtgaag
ccggcgtacctgtacgaggaggtgctgagggtggagcggagggtcatcggcaaaaaaaca
cccaagaggaggaggacaccgagcaggagcaggagcaggagcaggagcaggagcaggagc
agcagcagcagcagcagcaggagcaggagcaggactaggagcagcagcaggactaggagc
agcagcagcagcagcagcaggagcagcagcaggagcagcagcaggagcagcagcaggagc
agcagcaggactaggagcaggaaacctcagagagaaaccggaggaccacgatga
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