Pempheris klunzingeri: 139217620
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Entry
139217620 CDS
T11454
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pklu Pempheris klunzingeri
Pathway
pklu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139217620 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pklu03000
]
139217620 (arid1b)
03021 Transcription machinery [BR:
pklu03021
]
139217620 (arid1b)
03036 Chromosome and associated proteins [BR:
pklu03036
]
139217620 (arid1b)
Transcription factors [BR:
pklu03000
]
Eukaryotic type
Helix-turn-helix
ARID
139217620 (arid1b)
Transcription machinery [BR:
pklu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139217620 (arid1b)
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139217620 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139217620
NCBI-ProteinID:
XP_070705094
LinkDB
All DBs
Position
18:complement(806452..834112)
Genome browser
AA seq
2077 aa
AA seq
DB search
MDASLGSATNSTTNNPPPTGTRSEFNHYYGNGRGGPCFDQHGGQQSAGTGVTAAHSVHST
MDQVQNSHEGYNNNSPYTHYPNYRPGYGSGGYGGMMSPSRQGSSLLGPGSGGGSSAAANH
SKAAMAATSSPAGGGVGGGNNGGFQRFPGQSQQQLHPSGATPTLNQLLTSPSTMMRGYGG
GYSDYNHPSAQQQPSMGPAKDMGSQYGSAAHGWGGQQRNHPAMSPGSTGQGGGRSQVAPM
DPMVMKRSQLYGMSNNPYSQQHGAPYSGQSYGSPSPHRYPMGMSSRGQMGMGGMQYPQQQ
MGSQYAQQQQNVGGYCQPGQPPYFSPPQQQPAAPSQPPYMQPRPLPQQEVPQEAYGGRGQ
SAAMTPGKPNHEEMSLSQQERPSSLPDLSGSIDDLPTGTEAAVSSGASGSGSAQGDQGTP
ARSPFSPHVSPRLPPPARTGPSPSPSLSPAGSSSQSRSGPMSPATSGPGSQLAPQVSGPG
SDVGPHPSQSAMTQDRGFPPSMQRSTPGPQFGPQQSAPPMSPHPAPGGPMHHSSYQQGSS
YGQYGPPGNYPRPPHYGGAPSANYSSPGPGPSLANSLGLNASSPMHGQGPSTPAGRGPGP
GPGGRPYPAGGGAMAPTSPGMPQPAGQGMGPPGHNASRKPPEVGPNAGPSANSSSSTSAT
AAQGRPPFARSPAYHNQSWPAGRPALSPTLHSSHPPPPHPHHHHPPPPPPPHHSQQGPYA
QPQPTMQTPPEHYGQGSYLGMAPMGGIGPGGPGGPYSQQTGNNSGRMTPQGPPYNAPSSG
PMMMPAEGMGPHPDAKQRVELNKEGVDPPKPKDSYSSQCVSKPPTPSPMSPSSASLSSYH
GEDSDSISSPAWPKTSSSPKPSVATMTSEKVTRLYDMGPEPERRLWVDRYLSFMEERGTP
VLNLPAVGKKPLDLFRLYLAVREIGGLAMVNKNKKWRALSSQLNVGTSSSAASSLKKQYI
QYLFAYECKVERGEEPPSDAAGPASDARKPPSLQTKIQPPSPANSGSLQGPNTPQSSSSS
LTEAPVDLKPPTPASTPHSQMGPQLGNRTMGGVSIQDPFSEGNDPAFHIKRGPGPGGTLF
QQGGGPTDPMMRMQYDAHKDPFVGPRKGPGSAEGFGPGQMPSGAMQDMYPRGPPSGPLTG
MGPRPQYPYGPGYERRPEHVMGPEGGMAPPGGQNNMGPSGNEAGLYPANRYPHQRHDGYG
QQYPHSMAYSSHQPLYPQQQGYKRPIEALYPPAKRHEGEAFPVQQFGSQQADMWGGYMGP
ERRPVQGQFSYPYTRDRQGPPQHGMMGSGPPAVSGGPGEGPQANMWHPRTDMGYTYGRQG
QGPPYPGMTRGDDQEGRTPQDGQWPPGHPGQRQPPYPPHSSSSSSSSSSPSMPPLPIRQP
PSSSFQATPTVPNHVTRPHSPSSFPRPLGGSMSPNGAPYLPAMKKPSIPPGPPPAQGLHL
LHREVSFPPSSVEATPPKLKPRRRLTAKDTGTPEAWRVMMSLKSGLLAESTWALDTINIL
LYDDSSVGGFNLTQLSGFLELIVEVYRRCLIQIFGILEEYEVGTEGQRTLLGPPPAPVEE
EVLKEPPATTSASNEEQRIPRRSAGVTEEVSPLLPAAAAINADEEVKDGELAVKEEVKEE
EHQEQAEHQEQAEPRPPQASKYDKLPVRVEETGEAWEEVEERWVELSRPNGFISGLLHWK
AGGGDSTTHILTGDSQRAGGGGSEEEEEEEEEEEEEEEEEEEGEQTAVSPGSPSEVGGQS
SPAARSPISQLEDEPRCWDEAPLSTAESWQDSLAKRCVCISNIVRSLSFVPGNDAEMSRH
PGLVLILGRLVLLHHHHPRRKQTPPSYQREEERGLACSRDEWWWDCLAALRENTLVTLAN
MSGQLDLSLYPESICLPVLDGLLHWMVCPSAEAQDPFSAAGGGSSLTPQRLVLECLCKLS
IQDSNVDLLLATPPFSRQQKLYATLVRLVGERKSQVCREMAVAVLSNLAQGDSTAARAVA
LQKGSVGTLIGFLEDSVAMAQYQSSHGMLHAAAPPEPPSVNMMCRAAKALLAMARVEENQ
TEFVLYESRLLDISLSTALKSSVAAIMCEVLFKIGRS
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagcctcggatcagccaccaacagcaccaccaacaaccctcctccgactggg
acccgctccgagtttaatcattattatgggaatggaagaggagggccttgctttgatcaa
catggcggacaacaaagcgcagggactggggtaacggcggcgcactcggtacacagcacc
atggatcaggttcagaactcccacgaagggtacaacaacaacagcccgtacacccactac
ccgaactaccgccccggctatgggagtggtgggtacgggggcatgatgagcccctctcgc
caggggagcagcctgctgggcccgggcagcggcggcggcagctcggccgctgctaaccac
agcaaggcggctatggccgccaccagctccccggctggaggtggagtcggcggcggcaac
aacggaggattccagcggtttcccgggcagagccagcagcagctacacccgtccggagcc
acgccgactttaaaccagttattaacgtctccgagcaccatgatgagaggctacggaggc
ggatattcagattataatcatccttctgcacagcagcagccgagcatggggccggctaaa
gacatgggctcccagtacggctcggctgcccacggctggggaggacaacaaaggaatcac
ccggccatgagccccgggagcaccgggcagggcggcggcaggtcccaggtggcgcccatg
gacccgatggtgatgaagcgctcacagctctacggtatgagcaacaacccgtactcccag
cagcacggggcgccatactccggccagtcctacggctccccctccccccacagatacccg
atggggatgtccagcagggggcagatggggatgggaggaatgcagtaccctcagcagcag
atgggctctcagtacgctcagcagcagcagaacgtgggcggctactgtcagcccggacag
ccgccgtacttcagccccccccagcagcagcccgccgccccgagccagccgccgtacatg
cagccgcgtccgctgcctcaacaggaggtgccacaggaggcgtacggggggcggggccag
tctgctgctatgactcctgggaaaccgaaccacgaggagatgagtctgagccaacaggag
aggccgtccagcctgccggatctgtccggctccatcgatgatttgcccaccggcaccgag
gcggcggtgagttcaggggcgtcgggctctggcagcgctcagggcgaccaggggacgccg
gcccgctctcctttctccccccacgtctcaccccgactccccccgccggctcgcaccggg
ccctcgccgtccccttcgctgtccccggctgggtccagcagccaatcgcggtctgggccg
atgtcccctgccaccagcggaccaggctctcagctggcccctcaggtctctggtcctgga
tcagatgtgggtcctcatccctctcagtcggccatgactcaggacagagggttccctccc
tccatgcagcgtagcaccccggggcctcagtttggcccccagcagtcggcaccacccatg
tccccccacccagcaccgggggggccgatgcaccacagctcctaccagcagggcagctcg
tacggccagtacggccccccaggtaactaccctcgccccccccactacggcggcgccccc
agtgccaactacagcagccccggcccgggtcccagcttagccaacagcctgggtttgaac
gccagcagccccatgcacggccagggcccgtccacgccagcggggcgcggccccgggccc
ggccccgggggccggccgtaccccgccggagggggcgccatggcccccacctcccccggc
atgccgcagcccgccgggcagggcatggggcctccggggcacaacgccagccgcaaacca
cctgaggtcggccccaacgccgggccgagcgccaactcgtcatcctcgacgtcggccaca
gccgcccagggcaggcctcccttcgctcgctccccagcctaccacaaccagtcctggcct
gcgggtcgacctgccctctctcctacccttcactcctctcatcctcctcctcctcaccct
catcaccaccatcctccacctcctcctccacctcaccactcccagcagggaccctatgct
cagccccaacccaccatgcagaccccccccgagcattatgggcaggggagctaccttggt
atggcaccaatgggaggaattggtcctgggggtcctgggggtccctacagccagcaaacg
ggcaacaactctgggcggatgacgccacagggacccccctacaacgccccatcctcaggc
cccatgatgatgccggctgaggggatgggtcctcatccagacgccaagcagagggttgag
ctcaacaaagagggcgtcgatccacccaaacccaaggacagctacagctctcagtgtgtg
tccaagccccccaccccgtcccccatgtcccccagctcagccagtctgtcgtcctatcac
ggggaggacagcgacagcatcagcagccccgcctggcccaagacgtccagcagccctaag
cccagtgtggccaccatgaccagcgagaaggtgacccggctgtacgacatgggcccggag
ccagagaggaggctgtgggtggaccgctacctgtccttcatggaggagagggggacgccc
gtccttaacctgcccgccgtgggaaagaagcccctggacctgttcagactctacctggcg
gtcagagagatcggaggcctggccatggtgaataagaataagaagtggcgtgcgttgtcg
tcccagttgaacgtggggacgtcgagcagcgccgccagctctctgaagaagcagtacatc
cagtacctgttcgcctacgagtgtaaggtggagcggggggaggagcctccgtctgacgcc
gcggggcccgccagcgacgccaggaagccaccttcgctccaaaccaagatccagcctcca
tctccagccaactcaggctccctgcagggccccaacacccctcagtccagcagcagctcc
ctgaccgaggcccccgtagacctgaagcccccgactccggcctccaccccacacagccag
atgggcccccagctgggaaacaggaccatgggaggagtaagcatccaggacccgttctct
gaaggcaacgatccagccttccacatcaagcgaggaccaggacccggcggcaccctcttc
cagcagggaggaggaccaacagatccgatgatgaggatgcagtacgatgcccacaaagac
ccattcgtagggccaagaaaaggaccagggtccgccgaaggctttggtcccggtcagatg
cccagcggtgccatgcaggacatgtacccccgcgggccgccctctgggcccctgacaggg
atgggccccagaccccagtacccctatggccccggctatgagcgaaggccggagcatgtg
atggggccagaaggaggcatggcgccccccggaggtcagaacaacatgggtccatctgga
aacgaggctggcctgtaccctgccaacaggtacccccaccagagacacgatggctacggg
cagcagtatcctcacagtatggcctacagctcccatcagcccctgtaccctcagcagcag
ggttacaagcgtccaatagaggctttgtatccgccggcgaagcgtcacgagggcgaggcg
ttccccgtgcagcagtttggctcccagcaggccgacatgtgggggggctacatgggcccc
gagcggcggccggttcagggtcagttctcgtacccttacacgcgggaccgccaggggccc
ccgcagcacggcatgatgggctcaggaccgccggcggtgtccgggggccctggggagggg
ccacaggccaacatgtggcaccccaggacggacatgggctacacgtacgggcggcagggc
caggggcccccctaccccggcatgacacgcggggacgaccaggaaggcaggaccccccag
gacggccagtggccccccggccatccgggccaacgccagccgccataccccccccactcc
tcttcctcctcctcttcttcctcctccccttccatgccccccctgcccatccgacagccc
ccctcctcctccttccaggccacgcccacagttcctaaccacgtgacccgcccccacagc
ccctcctccttcccccggcccctgggaggctctatgtcccccaacggcgccccctacctg
cccgccatgaagaagcccagcatcccccccggccccccacccgctcagggcctccacctc
ctccacagggaggtcagcttcccccccagctctgtggaggccacgccccccaaactgaag
ccccgacgccggctcactgccaaggacacgggaaccccggaggcgtggcgggtgatgatg
tcactgaagtccggcctattagcagagagcacctgggctctggacaccatcaacatcctg
ctgtacgacgacagctcagtgggaggcttcaacctaacacagctctctggtttcctggag
ctcatcgtggaggtttaccgccgctgcctcatccagatcttcggtatcctggaggagtac
gaggtcggaacagagggccagagaaccctgctgggacctccgcccgcccccgtcgaagag
gaggtgctaaaggagcctccagccaccacctctgcatctaatgaggagcagaggataccg
aggaggtcagcgggggtgacagaggaggtgtcaccgctactcccagctgcagctgccatc
aatgccgacgaggaggtgaaagatggtgagctcgctgtcaaagaggaggtgaaggaagag
gagcaccaggagcaggcggagcaccaggagcaggcggagccccgccccccacaggccagt
aagtacgacaagctgccagtcagggtggaggagacgggggaggcgtgggaggaggtggag
gagcgctgggtggagctgagccgacccaacggcttcatcagcggcctcctgcactggaag
gccggaggaggagactccacgactcacatcctgacaggagactcccagagagcaggagga
ggtggcagtgaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggag
gaagaaggggaacaaaccgctgtctctccaggatccccgtcggaggtcggaggtcagagc
tcgccggcggctcggagtcccatcagccagctggaggacgagccgcgctgctgggacgag
gccccgctgtccaccgccgagtcgtggcaggactccctcgccaagcgctgcgtctgcatc
tccaacatcgtgcgcagcctctccttcgtccccggcaacgacgccgaaatgtcgcggcac
cccggcctggtgctgatcctgggccggctggtgctgctgcaccaccaccacccccgcagg
aagcagacgccgcccagctaccagcgggaggaggagcgggggctggcgtgcagccgggac
gagtggtggtgggactgcctggcggcgctcagggagaacacgctggtgacgctcgccaac
atgtccggccagctggacctgtcgctgtaccccgagagcatctgcctgccggtgctggac
gggctgctgcactggatggtgtgcccgtccgccgaggcccaggacccgttctcggcggcg
ggcggcggctcctcgctcacgcctcagcggctggtgctggagtgtctgtgcaagctgagc
atccaggactccaacgtggacctgctgctcgccacgccgccgttcagccgccaacagaag
ctctacgccacgctggtgcgcctggtgggcgagaggaagagccaggtgtgtcgggagatg
gcggtggcggtcctgtccaacctggcgcagggcgactccacggcggcgcgcgccgtcgcc
ctgcagaagggcagcgtgggaactctgatcggcttcctggaggacagcgtggccatggct
cagtatcagagctcgcacggcatgctgcacgccgccgcgcccccggagccgcccagcgtc
aacatgatgtgccgcgccgccaaggcgctactggccatggcgagggtggaggagaaccag
acggagttcgtcctgtacgagagccggctgctggatatctcgctgtcgaccgccctcaaa
tcctcggtggcggccatcatgtgtgaagtactgtttaagatcgggcgctcgtga
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