Pempheris klunzingeri: 139217674
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Entry
139217674 CDS
T11454
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pklu Pempheris klunzingeri
Pathway
pklu03040
Spliceosome
pklu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139217674 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139217674 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pklu03041
]
139217674 (srsf5b)
Spliceosome [BR:
pklu03041
]
Common components
Common spliceosomal components
SR proteins
139217674 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
DUF7376
Motif
Other DBs
NCBI-GeneID:
139217674
NCBI-ProteinID:
XP_070705166
LinkDB
All DBs
Position
18:complement(16200483..16205855)
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AA seq
294 aa
AA seq
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MNGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGAGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKEINGRKI
KLIEAAKKRSRSRSRSESSSRSRSHSRGRSPSRSPRRSRSPAKAHRSRSRSHSGSPAGGA
SSPAPKSKEPTKRSSKTSKSATPPSPPPAQRASVSRSRSRSRSRSRSPSTDSQR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatgtcgtattttcatcggccgtctgagcccctcggcccgggagaaggatgtg
gagaggttcttcaaaggatacggccgcatccgagatattgacctcaagaggggctttggg
tttgtggagtttgacgaccccagggatgctgaagatgccgtctatgagctcgacggcaaa
gagctgtgcaatgaaagggtgaccattgagcacgcccgcgtccgtctgcgaggcggccgt
ggcagaggaggcggcggtgcaggggggcggttttctgatcgctatggcagaggctcccag
aacagtcggagtcgaaatcctcctccgatgcgcactgagaaccgcctgatcgtggagaac
ttgtcctctcgcgtcagctggcaggacctgaaagatttcatgagacaagcgggagaggtg
acatttgcagatgcacaccgccccaagctcaacgaaggggttgttgagtttgcctcttac
agtgatctgaaaaatgcccttgagaaactgtctggaaaggaaatcaatggcaggaaaatc
aagctcattgaagcagccaagaagaggtccagaagtcgttcccggtctgagagctcctct
cgctcgcggtcccattctcgcggtcgctctccctctcgctcccccagacgctcccgcagc
cctgcgaaggcccaccgctcccgctcgcgctcccacagtgggtcccccgctggcggcgcc
tcctccccagcccccaaatcgaaggagcccactaaacggtcctccaagacgagtaagtct
gccaccccgccctcccctccgcccgcccagagggcgtctgtctcccgctcccgctctcgt
tcacgctcccgctcccgctctccttcaactgacagccagcgctaa
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