Pempheris klunzingeri: 139218518
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Entry
139218518 CDS
T11454
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139218518 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139218518 (tnpo1)
03009 Ribosome biogenesis [BR:
pklu03009
]
139218518 (tnpo1)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139218518 (tnpo1)
Ribosome biogenesis [BR:
pklu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
139218518 (tnpo1)
Pre-60S particles
139218518 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Arm
TOR1L1_N
Vac14_Fab1_bd
Cnd1
TPR_IPO5
IBN_N
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
CEP104-like_TOG
HEAT_GCN1_C
MMS19_C
Ltn1_1st
UNC45-central
Dopey_N
TPR_TTI1_C
HEAT_DAAF5
VPS15-like_hel
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
139218518
NCBI-ProteinID:
XP_070706206
LinkDB
All DBs
Position
19:complement(18479566..18500863)
Genome browser
AA seq
891 aa
AA seq
DB search
MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQNFPNGVSDFIKSECLQNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNIMIPKFL
QFFKHSSPKIRSHAIACVNQFIISRTQALMLHIDPFIENLFALATDEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLQRTQDQDENVALEACEFWLTLAEQPVCKEVLCGHLSQL
TPVLVNGMKYSEIDIILLKGDIEEDEAIPDNEQDIRPRFHRSRTVAQQHEGDGIEEEEDE
DDELDDDDDTISDWNLRKCSAAALDVLANVFRDDLLLHILPLLKELLFHPEWVVKESGIL
VLGAIAEGCMQGMIPYLPELIPHLVQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLK
PLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKNLL
ILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALQS
GFLPYCEPVYQRCVNLVQKTLAQAMLHQSQPDQYEAPDKDFMIVALDLLSGLAEGLGGTI
EQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNP
ELISVCNNATWAIGEISIQMGPEMQPYIAMVLHQLVEIINRPNTPKTLLENTAITIGRLG
YVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAV
ASWVNPKDDLRDMFYKILHGFKNQVGEDNWRRFSDQFPMPLKERLATFYGV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaagccagacgagcaaggacttcaacaaattttacagctgctgaaa
gagtctcagtcgccagatacgtccacgcagagatccgtccagcaaagacttgagcagctg
aaccagtacccagacttcaacaactacttgatatttgttttgacgaagttaaaatcagaa
gatgaaccgacgcggtccctgagtggactgattttaaagaacaatgtgaaagcccactat
cagaacttccccaatggcgtgtctgatttcatcaagagcgagtgcctccaaaacatcgga
gactcgtctcccctcatccgggccactgtgggtatcctcatcaccacaattgcctccaag
ggagagctacaaaattggccggagcttctgcctaaactctgcctgctgttggattctgaa
gactacaacacatgtgagggagcatttggagccctgcagaagatctgtgaggactctgct
gagatcctggacagtgacatgctggatcgtcctctgaacatcatgatccccaagttcctg
cagtttttcaagcacagcagtcctaaaattaggtctcatgccattgcctgcgtcaatcag
ttcatcatcagcaggactcaagctcttatgctacacatcgaccctttcattgagaatctg
tttgcactggcgacagacgaggagccagaagtgaggaagaatgtgtgcagagctctcgtc
atgctgctggaagttcgactggatcgtctcctcccacacatgcataacatcatagagtac
atgcttcagaggactcaagaccaggatgaaaatgtcgctttggaggcctgtgagttctgg
cttactctggcggagcagccggtgtgtaaagaagtactgtgtggacacctctcccagctc
actccggtgcttgtcaacgggatgaagtactctgagattgacattatcctgctcaagggg
gacattgaggaagacgaggccattccagacaacgagcaagacatcaggccgcgcttccat
cgctcccgcaccgtcgcccagcagcatgagggcgatgggatcgaagaagaggaagatgag
gacgatgaactggatgatgatgatgatactatctctgattggaacctgcgcaagtgttcg
gctgcagcattggacgtgttggccaacgtgttcagggatgatctgttgctgcacattctg
cccctactcaaagagctgctcttccacccagagtgggtagttaaagagtctggcattcta
gtgctgggggctatagctgaaggctgtatgcaaggcatgatcccgtacctgcctgagctc
attccccatctcgtccagtgtttgtcagacaagaaggccctggtgcgttccatcacctgc
tggacactgagccgctacgcccactgggttgtcagccagccgccagatacctacctgaag
cctctaatgacagagctgctcaaacgtattctggacagcaacaagcgtgtgcaggaggct
gcttgcagtgcctttgccactttggaggaggaggcttgtacagagctggtgccctacctg
gcattcatcctggacacgctggtgttcgctttcagcaagtaccagcacaaaaatctgctt
attctttacgacgccataggaacactcgcagactcagtggggcaccatcttaataaaccg
gaatacatccagatgttgatgccgccactgatccagaaatggaaccagctgaaagatgaa
gacaaagatctcttccctttattagaatgtctgtcatctgtagccactgccttgcagagt
ggattcctgccctactgtgagcctgtgtaccaacgctgtgttaacctggtccagaagacc
cttgctcaggccatgcttcatcagtcacagccagaccagtacgaggcccctgacaaagac
ttcatgattgtggctttggatcttcttagtggactggccgagggtttgggaggcaccatt
gaacagctggttgctcgtagcaacatcctcaccctcatgtaccagtgcatgcaggacaaa
atgccagaagtgcgtcagagttcttttgccctgctgggagatctgacgaaggcttgtttc
caacacgtcaaaccatgcattgctgatttcatgcccatactgggtacaaatttaaaccca
gaattaatatcagtgtgcaacaatgcaacatgggcaattggagagatatctatacaaatg
gggcctgaaatgcagccgtacattgccatggtgctgcaccagctggtggagatcattaac
aggcccaataccccaaagactctactggagaacacagcaataacaattggtcgtcttggt
tacgtttgtcctcaagaggtggcacccatgctacagcagtttataagaccctggtgcacc
tctctacgaaatataagagacaatgaggagaaagactctgcattcagaggaatttgcact
atgatcagtgtaaatcctggaggtgtagtgcaggattttatattcttctgtgacgcagtg
gcctcctgggtaaatccgaaggatgatctcagagacatgttctacaagatccttcacggg
tttaagaaccaggtgggagaggacaactggaggcgcttctcagatcagttccccatgcca
ctgaaggaacgactggcaaccttttacggggtgtaa
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