Pempheris klunzingeri: 139218601
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Entry
139218601 CDS
T11454
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
pklu Pempheris klunzingeri
Pathway
pklu04020
Calcium signaling pathway
pklu04080
Neuroactive ligand-receptor interaction
pklu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139218601 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139218601 (grin1a)
04082 Neuroactive ligand signaling
139218601 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pklu04040
]
139218601 (grin1a)
Ion channels [BR:
pklu04040
]
Ligand-gated channels
Glutamate (ionotropic)
139218601 (grin1a)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
139218601
NCBI-ProteinID:
XP_070706335
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All DBs
Position
19:5896809..5928634
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AA seq
938 aa
AA seq
DB search
MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQPDGTCKEEMTLNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TTLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcctctcgtgctcctgcgcgcgggccggctgcgaa
ccgaaaatcgtgaacatcggggccgtcctgagccagaagagatacgagcaggtcttcaaa
gatgccgtgacccaggccaaccaggtctacggcagggacaaattcaagctgactgccatc
tccgtaactcacaaacccaacgccatccagatggctctctccgtgtgcgaggacctcatc
tccagtcaggtctatgctatcctggtgagtcaccctccccagtccaatgaccacctcact
ccgacgcctgtctcctacactgcgggcttctaccgcatccccgtggtggggctcaccacc
cgcatgtccatctactcagacaagagtatccacctgtcctttctgcggacagtccctccc
tattcccaccaggcgcacgtgtggttcgacctgatgcgcgagttcaactggaaccacatc
atcttgatagtgagcgacgaccacgaggggcgggctgctcaaaagaggctggagacgctc
ttggaggagagagaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggcgaaagagctggaggctcgagtcatcatcctgtccgcc
agtgaggaggacgctgctgctgtgtacaaggctgcccgcttcctcaacatgacgggctcg
ggctacgtgtggctggtgggcgagcgtgagatgtcgggtaaagccctgagcgaggcgcca
gacggtctgattggcctccagctcatcaacgggaagaatgagtcagctcatatcaatgat
gcagtggctgtcgtggctcagtccatccaggagctctttgagaaggagaatatcacagaa
cccccacgagggtgtgtgggcaacaccaacatctggaaaacggggccactctttaaacgt
gtgctgatgtcatctaaatacccagagggactcacaggtcgcgtggagttcaatgatgat
ggagacaggaagtacgcccactacagtatactcaactaccagaagagtcgactcattcaa
gtcggcatatacaacggaactcaggtggtaatgaacaatcagcggaagatcatctggcct
ggaggagagacagagaaaccacagggcttccagatgtccactcgattaaagatagtgacg
atacaccaggagccatttgtgtatgtgaaacccactcagccggatggaacatgcaaggag
gaaatgacactaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggacgcccaattgtaccccaatgttgttatggattctgtattgatctcctgatc
aagttggctatgaccatgaactttacctatgaggtgcacctggtggctgatgggaaattt
ggaactcaggagcgggtgaacaacagtaacaagaaagagtggaatggcatgatgggagag
ctcctggggggcctggctgacatgattgtagccccgctgacaataaacaacgaacgagcc
cagtacatcgagttctccaaaccctttaaatatcaaggcctcaccatcctggttaaaaag
gaaatccctcgcagtacactggactcgttcatgcagccgttccaaagcacgctgtggctg
ctggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagaccggttcagc
ccatttggaagatttaaagtaaacagtgaagaagaagaggaagatgccctcaccttatca
tccgctatgtggttctcctggggagtgctgctgaattctggaataggagaaggtgccccg
cgcagcttctcagcgagaatcctcggcatggtgtgggccggctttgccatgatcattgtg
gcctcttatactgctaacctggctgccttcctggtgttggaccggcctgaggagcgcatc
accggcatcaatgacccaaggctgagaaacccatcggacaagttcatctacgccacggtg
aagcagagctccgtggacatctacttccggcggcaggtggagcttagcaccatgtaccgc
cacatggagaagcacaactatgagagtgccgccgaggccatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcaaggagcaatgcc
ccagccacactcacctttgagaacatggcaggagtcttcatgctggttgctggaggcata
gcagcagggatcttcctcatctttatcgaaatcgcctataagcgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaatgtctggaggaagaacctgcaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaccctggcctccagcatcaagagacgtaggtcctccaaagacacgcagtacccaccc
actgacatcacaggccagctcaacttgtctgacccgtctgtcagcactgtggtgtaa
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