Pempheris klunzingeri: 139218750
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Entry
139218750 CDS
T11454
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
pklu Pempheris klunzingeri
Pathway
pklu04510
Focal adhesion
pklu04512
ECM-receptor interaction
pklu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139218750 (lamc3)
04518 Integrin signaling
139218750 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139218750 (lamc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Mod_r
XLF_CC
STX17_N
MCP1_SIFV
DivIC
Motif
Other DBs
NCBI-GeneID:
139218750
NCBI-ProteinID:
XP_070706526
LinkDB
All DBs
Position
19:complement(17199127..17294238)
Genome browser
AA seq
1638 aa
AA seq
DB search
MDTSFAVRSLLLALLLSLHLHCHLLVWAAMDSCYDERSVMSRCMPKFENIAFNRTVVASN
VCGSPPEDYCMQTGSTRSCHHCDASDPDLSHNASLLTDFHRNEEPTWWQSQSMYYGIQHP
NSVNLTLHLGKAFEITYIRLKFYTSRPESFAIYKRTEEDGPWLPYQYYSASCRKTYGKDA
KAYIRPGDDERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSKVLQEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECIEGEHGGLVCSCQHH
TVGDDCQRCHPFYQDRPWARATGDSANECLKCNCSGRSDDCVFDMEQYRSTGSGGRCVSC
RDNTDGPHCERCRENHYRKSAEEPCLPCNCNINGSVSLQCDVGGRCACRVGVTGEKCDTC
RAGFHSLGPGGCRPCDCDSSGSVDHCSPLDGRCHCKANVEGQSCDRCKPGFFNLQQVNPA
GCQPCFCFGHSLACSSSNHYTAVNITSDFIEDQDGWLGEFFGGQEYPLLWKEGEIYLLPL
TEEDIGFYKAPEKFLGHQVYSYGQLLSITFTSETTELLPHHVTLLLRGSGIALSADLSPQ
PVLDHDPSLTPRRSFIVRLHESEVRFKPQVSAFDFQRLLYNLTALKISNAGGHNYTSQLA
AVTLPSAFIPPGPTSPPAPWVESCSCPPGFAGQFCEQCAPGFTREDPGRGPLSTCVLCNC
HQHGTCHPETGVCECSDFTTGMTCEHCLDGYYGNALIGTPGDCQPCPCPDRTSCVQISET
GQVVCTNCPTRQTGMRCQMCEDGYYGDPLGRSGPARPCVRCECNGNVDFNAVGICDHITG
RCLKCLGHTEGDHCQRCRRGFYGDALKQTPGQKCKPCSCDPAGISGHANECHPQTGNCQC
LSHVTGRDCSYCDVGFFNLQPGVGCERCKCNPIGSSSNACHPLTGQCMCRAGVEGLLCDS
CRVGFFGFSSRGCRACNCDPMGSISMQCHSNGTCHCRQGFVGYKCDKCELNYFHNRSTHQ
CQECPVCYGLVKKQAEKLGTRLQDLEKLFAHFDCRGRFAKQQHLLKYHMARLYEHEHQRE
DTLPNALEDFLAFQEAREAFIKQFSLLEASTGALLAQLHGITSTLNCSISMTEEGSEERR
KDEGSRGVCQTFTETIFMIRASQKQLKRATLDLDNMVIPFEVVSGPNKWNIMVNDSQVLM
KSHRETADHIEAVASRAVRASKQTFGFLMDLLQDNSTEEYIRNLTEQITQMQQQKENLTA
QVNDVVSKQLALEEEAAGSKVALGNITSSLHQLGLTDASPSPQPDQTQLNQTHPTNHTAE
WGEDLQKQTEELDQQIRSKDNLISKIREDMEPLKHTAKKKLEMVDDISELQAHTQGAKVM
ALSSVVAGKEMESDAISLHRELEHMVREWPRRQVQTKAAMKKEKPLGEKVLADVRKRVSE
IEQLIKPALENSSLSSNTTKEAELTAHAVAKESKAILTQAKHTRTASAHLSSHIDSALQQ
LAVQETLTDTANSQITSEPEVSLTSVKEDMEAAKLQLKAYSVTLTELISKIDGSVPLERF
DRILNETARRLSMLRGSVESPTLGLKIQKLHSAAKEQQSRLSLIEQDLQEIREERDSLRD
IALNLPQSCPQATGAGKG
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcctttgctgtacgctctcttctcctggcccttctcctctctcttcatcta
cactgccacctccttgtttgggccgctatggactcgtgctatgatgagaggagcgtcatg
agccgttgcatgcccaagtttgagaacattgccttcaatcgtactgtggtggcatcaaac
gtgtgcggttccccacctgaggactactgcatgcagactggctcaacgcgctcgtgtcac
cactgtgatgcatcagacccagacctgagccacaatgccagcctcctgacagacttccac
aggaatgaggagcccacgtggtggcagagccagtccatgtactatggcatccagcacccc
aattctgtcaacctcaccctccacctggggaaggcgtttgaaataacctatatacgattg
aaattctacaccagtcggccggagagcttcgccatctacaagcgcacagaagaagatggc
ccatggttgccttaccagtattacagcgcttcttgtaggaagacttatggaaaggatgct
aaggcttacattcgcccaggagatgatgagaggacagctctatgtacggatgagttcagc
gatatctctcccctcactggaggaaacgtggctttctccaccctggagggacggcccagt
gcatacaactttgaccaaagcaaggtgttgcaggaatgggtgacagccactgacctgctg
atctctttggacaggcttaacacattcggagatgagttcttcaaggacgctaaagtgttg
cgctcgtacttctatgccatctctgatttctctgtgggtggcagatgtaagtgtaacggt
cacgccagcgagtgcattgagggggaacacgggggtttggtctgttcctgccaacatcac
acagtgggagatgactgccagagatgtcaccctttttaccaggacagaccctgggccagg
gccactggggactccgccaatgagtgtttaaagtgtaactgcagtgggaggtcagacgac
tgcgtgtttgacatggagcagtaccggagcactggcagtggggggcgctgtgtgagctgc
agagacaacactgacgggccccattgtgagcgctgcagagagaaccactacaggaaatct
gctgaggagccctgcctaccctgcaactgcaatattaatggttcagtgagtctgcagtgt
gatgtagggggaaggtgtgcgtgtcgagttggcgtgacaggggagaagtgtgacacgtgt
cgggctggctttcactcgctcggccccggtggctgcaggccgtgtgattgtgactccagc
gggagtgtggaccactgctctcctctggatggacgttgccactgtaaggcaaatgtggag
ggacagagctgtgacagatgcaagccaggctttttcaacctgcagcaagtaaacccagca
ggctgccaaccgtgtttctgtttcggacactcgctggcctgctcctcgtccaatcactat
actgctgtcaacatcacttctgacttcattgaagatcaggacggctggttgggagagttc
tttggagggcaggagtaccccctgctgtggaaggaaggtgaaatctacctgctgcctctt
accgaggaagacatcggcttctacaaagcccctgagaaattcctgggtcaccaagtctac
agctacggccagctcctctccatcaccttcacctccgagaccacagagctgctcccccac
catgtcaccctgctcctccgaggctctggaatcgccctgtctgctgacctttcaccccaa
ccagtgcttgaccatgaccccagcctcacaccacggcgctccttcattgtcaggcttcat
gaaagtgaggtgagattcaaacctcaagtgtctgcctttgatttccaacgtctcctttac
aacctgacagctctcaaaatcagcaatgctggaggacacaactacacatcgcagcttgca
gcggtaaccctgccctcagctttcatcccccctggtccaaccagccctcctgccccatgg
gtggaatcttgctcctgtcccccgggtttcgcaggccagttttgcgagcagtgcgcccca
ggattcacccgggaagaccccggcagggggccgctctctacatgtgtgctgtgtaactgc
caccagcatggaacctgtcacccagagacaggtgtgtgtgagtgctccgacttcaccacc
gggatgacctgtgagcactgtctggatggttactatggcaacgctttgattggcacgcct
ggtgattgtcagccttgcccttgcccggaccgtaccagctgtgtccaaatttcagagaca
ggacaggtggtctgtaccaactgtccgacacgacagacagggatgcgctgtcagatgtgt
gaagatggttattatggtgaccccctgggacgctctgggccggctcgaccgtgtgtgaga
tgtgagtgcaatggcaacgtggacttcaacgctgtgggtatatgtgaccacatcactggg
cgatgtctgaagtgcctgggacacacagagggcgaccactgccaacgctgtcgacggggt
ttctacggcgatgccctgaaacagacgcctggccagaagtgcaagccatgcagctgcgat
cctgctggaatctctggacatgcaaatgaatgccaccctcaaacaggaaactgtcagtgt
ctcagtcatgtgactggaagggattgcagttattgtgacgtcggtttcttcaacctccag
ccaggtgtaggatgtgaaaggtgcaagtgtaatccaattggctcatcatccaacgcgtgt
catccactcacagggcagtgtatgtgtcgtgcaggagtggagggactactgtgtgattct
tgccgtgtgggcttctttggattctcatcacgaggttgcagagcctgtaactgtgaccca
atgggctccatttccatgcagtgtcacagtaacggaacctgccactgtcgccagggcttt
gtgggttataagtgtgacaaatgtgagctgaactatttccacaacagatccacacatcaa
tgtcaggaatgcccagtttgctatggccttgtcaagaaacaggcagaaaagctggggact
cgcctgcaggatttggagaagctcttcgctcactttgattgtcgaggtagatttgcgaag
cagcaacacctgttgaagtatcacatggccaggctttatgagcatgagcaccagagggag
gatactctacctaatgctctggaggattttctagccttccaagaggcacgggaggccttc
ataaaacaattttccttgctggaagcttccacaggcgcactcttagctcagctgcatggc
attacatctactttgaactgcagcatcagcatgacagaggaagggagcgaggagaggagg
aaggatgaggggagcaggggtgtgtgtcaaaccttcacagagactattttcatgatcaga
gcatctcagaaacagctaaagcgtgcaacactggacctggacaacatggtcattcccttt
gaggtggtgtcaggacctaacaaatggaacataatggtcaatgactcacaggtcctaatg
aaaagtcacagagaaacggcagaccacattgaggccgtagccagcagggcagtgagagcc
tcaaagcagaccttcggtttcctgatggatctgttgcaggacaactccacagaggagtac
atcaggaacctaacggagcaaataacacaaatgcagcagcagaaggagaacctgacagca
caggtgaatgatgtagtttccaaacagcttgccctagaggaggaagctgctggttcaaag
gttgccttgggaaacatcacatcatccttacatcagctgggtctgacagatgccagccca
tcaccacagcccgaccaaacacagctcaaccaaacacatccaaccaaccacactgcagag
tggggcgaggacctgcaaaaacagacagaagagctggaccagcaaattcggagcaaagac
aatctcatcagcaagatcagagaggacatggagcctctaaaacacactgccaagaagaaa
cttgagatggtagatgacatcagtgagctgcaagctcacactcaaggggcaaaggtcatg
gctttatcgtccgtggtggcagggaaagagatggaatcggacgcaatctctctgcacaga
gaactagagcatatggtgagggagtggccccgtcggcaggtccaaaccaaggctgcgatg
aagaaggaaaaacccctgggggaaaaggttctggctgatgtcaggaaaagggtctcagag
attgagcagttgataaaaccagctctagaaaactccagcctctccagtaacaccacgaag
gaggcagaactaacagcacatgctgtggcaaaagagtctaaagccattctgacccaggcc
aagcataccaggactgcatctgctcatcttagctcccatatagactctgctttacagcag
ctggctgtgcaggagacgctaactgacacagcaaactcccagatcacctcagagcctgag
gtgtccctgactagcgtaaaggaggacatggaggcagccaagctccagttaaaggcctat
tctgttacactaactgagctaatcagcaagattgatgggagcgtgccgctggagagattt
gaccggatcttgaacgaaacagctcgcaggctgagcatgcttcgcggcagcgttgagagc
ccgacgctgggattgaagatccagaagctgcactcggctgctaaggaacaacagagccgg
ctgtccctcattgaacaggacttacaggagatcagggaggagagagacagtctcagggac
atcgccttaaacttgcctcagtcctgccctcaggccacaggagcaggcaaaggctag
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integrated database retrieval system