Pempheris klunzingeri: 139219288
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Entry
139219288 CDS
T11454
Symbol
taf1c
Name
(RefSeq) uncharacterized protein taf1c isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pklu Pempheris klunzingeri
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pklu03021
]
139219288 (taf1c)
Transcription machinery [BR:
pklu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
139219288 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
139219288
NCBI-ProteinID:
XP_070707200
LinkDB
All DBs
Position
19:complement(8123243..8134656)
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AA seq
899 aa
AA seq
DB search
MEQRQRLLFSEGATGGALAYVPLSQSGSSSQHGYLIYPGNQGLDCLNFHPVELQHRSGSS
PCVDASSSDPFSFQLKGPVRQISAVSLFNDSCVGVRSDHLCGVWRSSESSKPRLLQVINT
REVATCISVSPHVLGEVLVASESGAAHLWTVGRGMQNVREEDSNLYFNAKSPWRWCEFSA
HPRVMLYADRTGVELTDIRVNPVVGHTLFRISSIAECRSGERLILSRYLGDAHSFHHLIT
TQCSAYIVDERFPGVPMLKWDHMMQSPPMFCHIIPGGATSGSAGGGARTTKVLLGSHSYQ
EITLLQYSGGRAEACFSQGLPQALLRPRDSLDQLPVQIPHRLDTATSRLSLPAAGLTCIH
KKGGRDATGEECVCVLQLTEAGDIFYQILEPEQPDTSQPPAAETEPLPQQEAKRQPQPTR
EETQLVVSDTSDDEDVVAPTQGPTARRFVAETPVKEQRTLNVYFDSSSEESESIDRGRNL
KHLRLQVVINDDPEPDQVGELDAGVRDGKLGKDNTEEADSGSSRLSYVGLTTLQSPVKLS
SSALVTWKRWLQKLMQKSREKKPRPRCLQHFTMKSEGLLQLSDSEGRDPTEEERMHSLKR
DLKACMSKRSLLVHSAVSASLEAPEAVHLPNLVDTEIWTDELSHRLTVSWQGEEAWRAWW
DNHLGLNREKKVAALKRKRRMEKGARRAAGQRLDLSGSFTSSLSYQSELDDFSDATGWSS
ATSQQAWSDSESAQSQWGGFWKGRRPRAMTPPSVQTDSPVPTPSATPLRVREQEGDQQIP
SSSLILSLPQTPKLDPTAANQRRNKRAADDYLSSLFAPQDEPSQHDGYFLDEGSSDPPPP
PVASSSQLHSSQSVPQRSIRVDLSQDTSVWSGFSQSLSLSQRSQGRQASQPKKKSRMGF
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagacagcgcctgctgttctctgaaggagccactgggggtgcgctggcctat
gtccccctctctcagagtggcagcagctctcagcatggctacctcatctaccccgggaac
cagggactggactgcctcaacttccacccagtggagctgcagcaccgcagtggaagttcg
ccctgtgtggacgccagcagcagtgacccgttcagcttccagctcaaaggccccgtcaga
cagatcagcgccgtctccctgttcaacgactcttgcgttggcgtgcggtcagatcacttg
tgtggagtttggcggtccagtgaaagcagcaaacctcgtctgctacaagtcatcaacact
agagaggtcgcgacctgcatcagcgtcagtcctcatgttttaggtgaagttctggtggca
agtgagagcggagcagcacacctgtggactgtcggcagaggaatgcagaatgttcgggag
gaagacagcaacctgtacttcaatgccaagtcgccatggcgatggtgcgagttctctgcc
cacccaagagtgatgctgtatgcagacaggacgggggtggaactcacagacattagggtg
aatcctgtcgtcggtcacactctgtttcgtatcagcagcatcgcggagtgtcgcagtggg
gagagactcattctgtccagatatctgggagatgcccattccttccaccacctcattacc
actcagtgttcggcctacattgtggacgagcgtttccctggcgtgcccatgctcaagtgg
gatcacatgatgcagtccccccccatgttttgtcacatcattcctggcggcgccacctct
ggctcagcagggggtggggctaggaccacaaaggtcctgttgggctcccacagttatcag
gagatcacactgctgcagtactcaggtggcagagcagaagcctgtttcagtcaaggtctt
cctcaagctctgctcagacccagagacagcctggaccaacttcctgtccagatccctcac
cgcctggacacggcaaccagcagattgtccttacctgccgcaggtctgacttgtatccat
aagaaaggaggaagagacgcaactggtgaagagtgtgtctgtgtcctccagctgacggag
gcaggagatattttctaccagatcctggagcctgagcagcctgacacctcccaacctcca
gcagcagagaccgaaccgctgcctcaacaagaagccaaaagacagccacaaccaactcgt
gaggaaactcagctggttgtatcagacacatcagacgatgaagatgtagtcgctccaacc
cagggtccgactgcacggaggtttgtagctgaaacaccagtgaaggaacagcgaacactg
aatgtgtactttgactcttcctctgaggagtcagagtcgatagacagaggtcgaaacctg
aagcatttgcggctgcaggttgtcataaatgatgatccagagccagatcaagtaggtgaa
ttggatgcaggtgtgagagatggaaagcttggtaaagataatactgaggaagcagattca
ggctccagcagattgagttacgttggtctcaccacgttgcagtctcccgtaaagctcagc
agcagcgctcttgtcacatggaagcgttggctccagaaattgatgcaaaagagtcgtgaa
aagaagccccgcccgcgctgcctacagcacttcacaatgaaatctgaaggcctcctccag
ctgtctgacagtgaagggagagatccgacagaagaggagcgcatgcacagcctgaagcgt
gacctgaaagcgtgcatgtctaaacgctcgctgctggttcacagtgcggtctctgcctcc
ctcgaggctccagaggcggtgcacttaccaaaccttgtggacacggaaatctggacagat
gagctcagccaccgtctgactgtctcctggcagggggaggaagcatggcgagcatggtgg
gataaccacctggggctgaacagagagaaaaaggtggcggctctgaaaaggaagaggaga
atggagaagggggcgaggagagccgccggccaacgcctggatctgtccgggagcttcacc
tcatctttgagctaccagtcagagttggatgatttctcagatgcgacaggctggtcctct
gcaacaagccagcaggcatggtcggactccgaaagtgctcaatctcagtgggggggcttt
tggaagggcaggaggccaagagccatgacacccccctccgtgcaaactgacagccctgtc
cccacgccatctgctacaccgctacgtgttagagagcaagaaggtgaccagcagattccc
agcagctccctcatcctctccctgccccagacgccaaaactggaccccacagccgctaat
cagaggaggaacaaacgtgcagccgacgactacctcagctctctgtttgcaccacaggat
gagccctcgcagcatgacggttactttttggatgagggcagtagcgaccccccacctcca
cctgtggcctcttcctctcagctccacagctcccagtctgtccctcagaggagcatcagg
gtggatctgtcccaggacacctccgtctggtcggggttctcccagtctctgtccctctcc
cagagatcacagggtcgacaggcatcacaacccaagaagaagtctcgaatgggattttga
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