Pempheris klunzingeri: 139219738
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Entry
139219738 CDS
T11454
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03420
Nucleotide excision repair
pklu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
139219738 (ercc4)
03460 Fanconi anemia pathway
139219738 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pklu03032
]
139219738 (ercc4)
03400 DNA repair and recombination proteins [BR:
pklu03400
]
139219738 (ercc4)
DNA replication proteins [BR:
pklu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
139219738 (ercc4)
DNA repair and recombination proteins [BR:
pklu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
139219738 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
139219738
NCBI-ProteinID:
XP_070707782
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All DBs
Position
20:complement(15041325..15046720)
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AA seq
899 aa
AA seq
DB search
MAGPLLEFETEMFLSLFGSDGLLVVAEGMGIDRVLLQFMRVYSEQGSLVLLLNTTTPEQE
YFTEQLRMEGVTHLPRTVTSDVQSTERYDVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALERHKPEVVELHVSLTPTMRAIQSSIMDIMSACLKELKRYNPTLEAE
DLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKGLVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKIFGSNSGWLFLDSSTSMFVNARGRVYCIPESKKKLKVGAEAEKQKSSSALVV
KRELVLEKSPKWAALTEVLQEIERENKSCQHEPGCVLICASDDRTCAQLQQYIKHGAERL
LNRLYARTVGKGDSAAASAFELDSHKTDKGWPKKGAKGMEPAQKKTTKSTKNKKRPSLTL
TQMVGKEGTDEAAVMGSSGDEDELMEEDEGEGEQLKLDLSSDAYYGVLKEPLTVIHPLKG
LTDPHSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKASRPGKALRVYFLIYGGSTEEQKY
LTALSKEKKAFEHLIREKATMVIPEEREGREDTNLDLARNLEAANATTNTRKAGGQEQPN
EPSRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPDTCVERKSVSDLIGSLQSG
RLYTQCLSMTRYYKIPVLLIEFDPAKPFSLMSRSDFRHEISSNDISSKLTLLSLHFPRLR
ILWCPSPHATAELFLDLKKGRSEPDAAAAQAVTAESDLVAESANVYNPGPYDFLLKMPGV
NAKNYRALIKNADSLADLVKLSQDKLAKILENANNAKLLYEFLHNVADVPAPAQKAKRT
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgctgctggagttcgagactgagatgttcctgagtctgttcggctctgac
gggctgctggtggtggcggaggggatgggcatagaccgcgtcctgctgcagttcatgcgg
gtttactcggagcagggcagcctggtccttctgctcaacacaaccacacctgaacaggag
tatttcacagagcagttgcgaatggagggtgtgacccacctgcccaggacggtgaccagc
gacgtccagagcactgagcgctatgatgtttacactgagggaggagtgctgtttgtcacc
agcagaatcctggtggtggacttcctcactgaccgcatccctgctcatctcatatcaggt
attttagtgtatcgcgctcataaaatcattgagtcgtgtcaggaggccttcatccttcgt
ctgttcagacagaagaataagacaggcttcattaaagccttcaccgacaaagccacggcc
ttctcctctggcttctgccaggtggagcgtgtgatgaggaacctcttcgtcaagaagctc
tacctgtggcccaggtttcaagcatccgtgaacacagcattggaaaggcacaagccagag
gtggtggagctccatgtgtcattgacgccaactatgagggccatccagagctccattatg
gacatcatgagcgcctgtctgaaggagctgaaacgctacaaccccactctggaggccgag
gacttgtccctggagaacacactaggcaacgcctttgaaaagaccatccgtcactacctg
gaccccttgtggcaccagctgggagcaaagaccaagggcctggtccaggacctgaaagtg
ctgagggttctcctgctctacctcacccagtacgactgtgtaaccttcctcaatctgctc
gagtcgctgcgctccagccaaaagatctttggatccaattcggggtggctgttcctagac
tccagtacctccatgtttgtgaatgccaggggtagagtgtactgcatccctgagagcaag
aagaagctcaaagtcggagcagaggcagagaaacagaagtcatcctctgccttagtggtg
aagcgggaactggtgctggagaagagcccaaagtgggcggctctgactgaagtactgcag
gagattgagagggagaacaagagctgtcaacatgaaccaggttgtgtgctgatctgtgcc
agtgatgacaggacttgtgcccagctgcagcagtacatcaagcacggcgctgagcggctg
cttaaccggctgtatgcccgcacagttggtaaaggggattctgctgcagccagcgccttt
gaacttgactcgcacaaaacggacaaaggctggcctaaaaaaggagccaagggaatggag
cctgcacagaagaaaaccacaaagtccacaaagaataaaaaaaggccgtccctgaccctg
actcagatggtggggaaggaggggacagatgaagcagctgtgatgggcagcagtggagat
gaggatgaactgatggaggaggatgaaggggagggagaacagctgaagctggatttgtca
tcagacgcgtactatggtgtcctaaaggagccgctgactgtcatacacccactgaaaggc
ctcactgacccccacagcctgacgcgggtgctgcatgaggtggagcccagtttcgtggtg
ctgtatgacgctgagctcagtttcgtccgccagctggagatctacaaagctagccgtcct
ggaaaggcacttagggtgtatttcctgatctatggaggttcaacagaagaacagaagtac
ctgacagcgctgtcgaaggaaaagaaagcctttgaacaccttatcagggaaaaggctact
atggtcatcccagaggagagggaggggcgagaagacaccaacctggaccttgcaaggaat
ttagaggctgccaatgccaccaccaacacccgcaaagcaggaggtcaggagcagcccaat
gagccgtcacgagtcattgtggatatgcgtgagttccgcagtgaactaccctccttgctg
caccgccgtgggctggacatcgagccagttaccctagaagtaggtgactacatcctgacc
ccggacacgtgcgtcgagcgcaagagcgtcagtgatctgatcggctcgttgcagagcggc
cgcctctacacccagtgtctctccatgacccgctactacaagataccagtgcttctcatt
gagtttgacccagcaaaaccgttttccttaatgtcccgatcagatttccgtcatgaaata
tcatctaatgatatttcttcaaaactcaccttactcagcttgcatttcccccggctacgc
atcctatggtgcccgtccccacacgccacagctgagctcttcctggatctaaagaaaggt
cgctctgaacccgatgctgcagcagctcaggcagtcacagccgagtcagacttggtggct
gaatcggcaaacgtctataaccctggaccttatgacttcctgttgaaaatgcctggagtc
aatgcaaaaaactatagggctcttataaaaaatgcagacagcctggcagatttagtcaaa
ctcagccaggacaagctagcaaaaatactcgagaatgctaacaatgctaagttgctgtac
gagtttttgcataatgtcgctgatgtccctgctcctgcacagaaggcgaaacggacatga
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