Pempheris klunzingeri: 139219930
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Entry
139219930 CDS
T11454
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pklu Pempheris klunzingeri
Pathway
pklu04514
Cell adhesion molecule (CAM) interaction
pklu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139219930 (lrrc4bb)
04517 IgSF CAM signaling
139219930 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pklu04515
]
139219930 (lrrc4bb)
Cell adhesion molecules [BR:
pklu04515
]
Immunoglobulin superfamily
NGL family
139219930 (lrrc4bb)
SSDB
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
LRR_NXF1-5
DUF7617
Motif
Other DBs
NCBI-GeneID:
139219930
NCBI-ProteinID:
XP_070708043
LinkDB
All DBs
Position
20:complement(12339101..12342481)
Genome browser
AA seq
745 aa
AA seq
DB search
MRVVMVTSPCTPSPLLWLVQLLLWFHNHGPQLTEAAPPCPTLCTCSNQASRVICTRKSLD
QVPDSISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGDEENSARQYINETFIDFPNP
TVQRGVLEGRPGITISPSLTSLSSLSPRTNRATENAVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGGGGEGTLRIHHPEIVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGTEGMGPGILNNK
NQQLQDIPISCTSVPISTSNLLTSSGNGTNTNPSSMSPPLPMSLPMPTMGLHGSIKGFMG
QNQNPQMEPLLFKGNSKENVQETQI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgtaccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggacctcagctgacagaggcagcacccccctgcccc
accctctgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaaaagtttagat
caagtcccagacagtatttcagaaaacacaagatacctcaatctacaagagaacacaatt
caggtgatcaagtctgacacatttaagcacctgcggcatttggaaatcctccagctctcc
aagaaccacatccggcaaattgaggtgggagcattcaatggccttcccaacctcaataca
ctggagctttttgacaaccgtctcacagtggtgccgtcacaagcctttgagtacctcagc
aagctaagggaactatggctgcgaaacaaccccatcgagacactgccggcatttgccttt
caccgtgttccctctttacgccgtctcgatctaggggaactcaggaagctggatttcatc
tcagaggctgcctttgaaggtctggtcaacttgcgcttcttgaatcttggcatgtgcggc
ttgaaggacatccctaacctcaccccgctagtacgactagaggagttggagctgtcaggg
aaccagctggggatcgtcaggcctggatccttccagggccttgtatcacttcgcaagctg
tggctaatgcactccagagtgtcagtaattgaacgcaatgcttttgatgatctcaaaaac
ttggaagagctcaacctttcccacaattccctgcattccctgccccatgacctcttcacc
cctttgcaccagttggagagggtacatctcaaccacaacccttgggtgtgcaattgtgat
gttctgtggctcagctggtggttgaaagaaacagttcccagcaacaccacatgttgtgct
cgatgccacgcaccgccaggtctaaagggcaagtatattggggaactagaccagagtcac
tttacctgctatgccccagtgattgttgagcctcccactgacctcaatgtcactgaaggc
atggctgctgagctcaaatgtcgcactggaacctcgatgacctccgtgaattggttcact
ccaaatggcactctgatgacccacggatcgtaccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaatgtgaccgtgcaagacactgggcagtacacttgcatggta
accaactccgccggaaacaccaccgcaactgccgtgctcaatgtgtctgcttcagacccc
agcaacagctacagctatttcaccactgtcactgtggaaacagtagagacagtgagagga
gatgaggagaattcagcaagacagtatattaacgagaccttcatagatttccctaatcct
actgttcaaagaggagtgttagagggccgacctggcatcactatatcgccttcgctcacc
tctctttcctcactgtccccacgaaccaacagagctactgaaaatgcagtgactgtgtcg
ataatggatgtaactaacattccaggcctggatgatgtaatgaaaacaactaagatcatc
attggttgcttcgtggccattacctttatggcagctgtaatgttggtggtcttctataaa
ctccggaagcagcaccagctacataagcaccacggccctgccagagccattgaaatcgtc
aatgtagaagatgagatcggagccggggccggtagtggaatctcaggtggttcaaccatg
aattctggcggtggtggagagggaaccctaaggatacatcatccagaaatagtcaacctt
cccaacattggccgtacagatactctcaatcattactacaagacccatcatttcaacaac
aatgtgatgggccttagtattggcactgaagggatgggaccaggaatccttaataacaag
aaccagcaactccaggatatccccatctcctgtacctcagtcccaatctctacatctaat
ttgctcacctcatcaggcaatggcaccaacaccaaccccagttctatgtccccaccgctg
ccgatgtctctccccatgcctaccatgggcttacatggatcgatcaagggtttcatgggc
caaaaccagaatccccaaatggagcctcttctcttcaaggggaactcgaaggaaaacgtc
caagagactcagatctaa
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