Pempheris klunzingeri: 139221856
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Entry
139221856 CDS
T11454
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
pklu Pempheris klunzingeri
Pathway
pklu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139221856 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pklu04812
]
139221856 (cald1a)
Cytoskeleton proteins [BR:
pklu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
139221856 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
139221856
NCBI-ProteinID:
XP_070709899
LinkDB
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Position
22:complement(5441828..5494519)
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AA seq
634 aa
AA seq
DB search
MEDIDFERRRELRRQKREEMRLEAQRFARNDDDEEEAARERRRRARQERLISKESEEPSG
QPDSLVLTNSHSVTETVSSSFGGGGGDDEDQALQERMAKREERRQKRMKEALERQRQLDH
GATEDNDSVATEKNNAEEERPSSWRRARYRDNEDEEEKTETYSSRREEKGREQPREEEEA
APEGGEEAEEGVEEEEVQEVEVVEDKPRRSYLREQESTEEPKIQNKELTEEETCSVVSES
SKQAKSSDSGAEEDAVASEEAEGVPEDDNVDYSSENKAMTLRNETEEDYEVSEILRSEDN
EVNERGGAREEWEEQRKQNGGLHEEATPKQHRKPERTLSRGSVRSPEVSAGDDQDDAARL
EAERKLEELKRRRDDAESEEFERMRQKQQEAEAELEELKRKREERRKVLEEEERQRKQEE
AEKKAREEEEKRKMKEEIERRRAEAAEKRQKVEDTVDGEGRPFKCVSPRGSSLKIGERAE
FLNKSAQKSSTVKAAHSPVVSKIDNRLEQYTSAAQQRENKESRSPRSGAVDLPMVTDSIR
NIKSMWEKGNVFASPGSGGGTFKEAAVMKTGVAGRINDWLNKTPESGKASGGRPMDLKPV
DVTNKRSLWENKGASPTKVAGKGETKSVANGMGH
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaggatattgactttgagcggcgccgggagctgaggaggcagaagcgggaggagatg
cgcctggaggcccaacggtttgcgaggaatgatgatgatgaggaggaggcggcccgcgag
aggaggcgccgggcacgccaggagaggttgatcagcaaggagagcgaggagcccagcgga
cagccagacagtctggtcctgaccaacagccacagtgtgacagagactgtgagcagctct
ttcggaggaggtggcggagacgacgaggaccaagccctgcaggagcgcatggccaaacgc
gaggagaggcggcagaaacgcatgaaggaggctctggagagacagaggcagctggaccac
ggcgcgacagaggacaacgacagcgtcgccacggagaaaaacaacgccgaagaggagagg
ccctcctcctggcgcagggcccgttaccgtgacaatgaggatgaagaggagaagacggag
acgtacagctcaaggagagaggagaagggacgagagcagccaagggaggaagaggaggcc
gctcctgagggtggagaggaagcagaggagggtgtagaggaagaggaggtgcaggaagta
gaagtggtggaggacaaaccgagaaggtcttacttgagagaacaggaatcgactgaagaa
cctaaaatccaaaacaaggaactgactgaagaagaaacgtgttcagtagtcagtgagagc
tcaaaacaggccaagtcatcagattcaggggctgaggaggatgcagtagcatcagaggag
gctgaaggggtacctgaggatgataatgtagattattcatcagagaacaaggctatgaca
ctcagaaatgagaccgaagaggactatgaggtatccgagatactgcgctcggaggataat
gaggtgaacgagagaggcggggcaagggaggagtgggaggagcagaggaagcagaacgga
gggctgcacgaggaggcgactcccaaacagcacaggaaacctgagaggaccctcagtcgc
ggcagtgtacgctcccccgaggtgtccgcgggtgacgaccaggacgacgctgcccgcctg
gaggcagagcgcaagctggaggagctgaagcgtcgccgcgacgacgcggagagcgaggag
ttcgagaggatgaggcagaagcagcaggaggccgaagccgagctggaggagctgaagagg
aagagggaggagaggaggaaggtgctggaggaggaggagaggcagaggaagcaggaggag
gcagagaaaaaagccagagaggaggaggagaagaggaagatgaaggaggagattgaaagg
aggagagcagaggcagctgagaagagacagaaggtggaggacactgtggacggggagggc
agacccttcaagtgtgtcagccctcgaggctcctctctgaagatcggagagagggcagag
ttcctgaacaagtcggcacagaaaagcagcacagtgaaggcggctcattctcccgtggtg
tccaagatagacaacaggctggagcagtacacctcagctgctcagcagagggagaacaag
gagtcccgatcccctcgctctggagcggtggatctgcccatggtcaccgacagcatacga
aacatcaagagcatgtgggagaaaggcaacgtgttcgcctcgcctggaagcggcgggggc
acgttcaaggaagcagctgtgatgaagacaggcgtggcgggccgcatcaacgactggctg
aataaaaccccagagagcggcaaagcgtcgggaggaaggccaatggacctgaagcccgtc
gacgtcaccaacaagaggagtctatgggaaaacaaaggcgcctctccaaccaaggtggca
ggcaaaggggagaccaaatcagtcgccaacggtatgggacactaa
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