Pempheris klunzingeri: 139222054
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Entry
139222054 CDS
T11454
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
pklu Pempheris klunzingeri
Pathway
pklu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139222054 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pklu03019
]
139222054 (nup50)
Messenger RNA biogenesis [BR:
pklu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139222054 (nup50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
UPF0508_C
Motif
Other DBs
NCBI-GeneID:
139222054
NCBI-ProteinID:
XP_070710125
LinkDB
All DBs
Position
22:complement(945796..955293)
Genome browser
AA seq
477 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEGEEAGTFSLASDDVLKNRAIKKAKRRNIGTESESSGAFKG
FKGFALSAASGASAPTAFSGFGNGGGGGGFKGLGGLTNGNSITPSFGGFSSPAATATASP
GLTFNGPTSADITAKQTNGSAPSPTQSSGSCGSGGSVGNKEYSRQLTALNCSVRDWITKH
VNDNPLCDLNPIFRDYERHLASIERQYGAGAGSADGGSEEKKQAGMLPASATPPPPPPPS
SSSSSSSSSTAAPAALFSFGKNTTEDSARDKSAAAAPIPAGVTFNFGQKVDSSVIGSLGS
KTTPPSFSFSSSSYSASSSQTSLFGAPGPLSFGGKTSEDAQPAVENGDEDSEEPPKPEVK
EVKEDDAFYSKKCKLFYKKDSEFKEKGVGTLHLKETDDGKTQMIIRADTNLGNILLNIIV
QSSMPCSRVGKNNVMVVCVPNPVVDDKNPSSPVPLLIRVKTAEDADELHKTLEGKKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgataaagagctaacggacaggaactgggatcaggaggaggag
ggagaggaggccgggacgttttcacttgcaagcgacgatgtgttgaagaatcgtgcgatc
aagaaggcgaagcgcagaaatattggaacggagagtgagagcagcggagccttcaaaggg
tttaaaggtttcgctttgagcgcggcgagcggagcctcggccccgacggcgttctctggc
ttcgggaacggcggaggaggcggcggcttcaagggcctcggcggtctgaccaacgggaac
agcatcactccttcgttcggaggtttctcatctcctgctgcgacagccaccgcttcacct
ggtctaacgtttaacggccccacctccgctgacatcaccgccaagcagaccaatggctcc
gccccgagcccgactcaaagctccggctcctgcggcagcggcggcagtgtcggcaacaag
gagtacagccggcagctcaccgctctcaactgctcggtgagggactggatcaccaagcac
gtgaacgacaacccgctgtgtgatctcaaccccatcttcagggattatgagcggcacctg
gccagcatcgagcggcagtacggagccggagcggggtcggccgacggaggctctgaggag
aagaagcaggcagggatgctgccagcctcagccacccctcctcctcctcctcctccctcc
tcatcttcctcctcctcctcctcctccacggcggctccggcagctttgttctcctttggc
aaaaatacgacagaagactcggcgcgggacaaaagcgccgctgctgctccgatccccgcc
ggcgtcacgtttaacttcgggcagaaggtggacagctctgttatcggctccttagggtcc
aaaacgactccccccagcttctccttctcctcctcctcctactccgcctcctccagccag
acctccctgttcggggctccggggccgctgtccttcggcgggaagacgagcgaggacgct
cagcctgcagtagagaacggagacgaagattcggaggagccgcccaaacctgaagtcaag
gaggtgaaagaggacgacgccttctactccaagaagtgtaaactgttctacaagaaggac
tctgagttcaaagagaaaggtgtgggaactctgcacctcaaggagacggacgatgggaaa
actcagatgatcattcgtgccgacactaatctgggaaacatcctgctgaacatcatcgtg
cagtcgtccatgccgtgctcccgggtcgggaagaacaacgtgatggtggtgtgcgtccca
aacccggtcgtcgacgacaagaaccccagcagccccgtccccctcctgatccgggtcaag
acggccgaggacgccgacgagctgcacaagacgctggaggggaagaaaggctga
DBGET
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