Pempheris klunzingeri: 139222723
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Entry
139222723 CDS
T11454
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
pklu Pempheris klunzingeri
Pathway
pklu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139222723
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
139222723
NCBI-ProteinID:
XP_070710671
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Position
3:26892246..26909357
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AA seq
1405 aa
AA seq
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MALGSTSSTSDLSLSAEGSGRRAESGDSVLITSSSSHAAGTGGSGASRISTTAPGASSAV
SAGGGGSAASGVSGVSGSRAAGGGSYSMSSSFASGVKEGKREGGLGAVTVSTVTKSSYSS
GGCGEARRGSSSAVTNSPVPKERKSVTTMAAALSEVFDESSSTNSSPEYNRKEYTTTSAT
SSLATRGRTQSRESEIRVRLQSASPTASWTELGDVKRLLRGNSISTSPTRSPNNTLPIPR
KASVETRTLSESSNTDHYDSVWSGGLSSSYGYNANPNNMSTTSTLYQPGVQNNLTLSAPS
MTSGLSASSTVPVYGLQNNLATSSSTAFSPTGANPHIVYGVQKNVPGTGISTSTVGPSSP
INDEASGKDFKFVLIEKENVPVKKETERLIMTKDTGKQFMSAAPLSAAATYSEDSLKREK
QKQSSSTMEEETDGKSATVKAATKDKATYAEIREDKSGFGFCSCCSWWKWLLGLLLSLLL
LLGLFFGLIALGEEVKRLKNRVDALEAITGTASARSSRLSASSGINIIDPLDSSYIERST
SGSTLTHSENVINQGSAGPGAGAGSGLGQDNAALQRAVQQLVRAELRSGAVRETLAYSLK
GDRGDPGPKGDPGPLGQKGESGFPGLPGPPGQLGHPGLDGPRGPKGSAGESGPEGPPGQR
GREGPMGPRGEAGLPGFGEKGRKGSQGDPGRPGPAGAAGPVGPKGAMGEQGAVGSPGLPG
LKGFQGEAGAPGAKGDRGTPGLLGSKGDQGERGPRGPVGEPGQPGLQGPAGPKGSKGIGG
DTGSMGLPGVRGPPGLPGDIGHPGLTGLQGPPGIAGNPGQPGGKGEPGLPGKVIMPIGSD
SVTIPGPPGPAGPPGPAGAPGLSGPIGPAGTPGQPGEQGEKGEKGETGQKGEQGKPGEPG
ISVTSSETVKLSSVAGQPGPPGPPGPPGPTGPQGESKQGPPGRRGSPGEPGIGLPGPPGE
KGEPGSFVPSSETFFAGPPGPPGPQGQQGPEGPQGYQGEPGQPGLPGSPGEPGAGLPGQP
GPSGPHGLPGVPGAPGVPGISSGGSYSPGPPGLPGPPGSPGSPGSPGRDGSGSGSADVGQ
YIAEYLQSGGVRQYLAGPPGPPGPPGAAGQAGDGLVDDVASRVLAYIQREEVRRYVSGPP
GPPGPPGEGVSSYIFNTQEVAERVLGLMNDRGVLGVPGPPGPPGSPGSPGSPGNILSTGY
EALVGPQGPPGPPGITGPQGPSGPAGPPGPPGFGNYISSDIHDYLQSVAFRGPPGPPGPP
GPEGPPGQIHGLVSYAEHSNKGALKAERQEYINTHGVLRDIVREYNSRVFQGPPGPPGPP
GPTGYSQWFGSHGNATDLLEYIKSYGAIVGPPGRPGQKGDGGFPGPKGERGERGLPGPEG
RQGEKGEFTLTKRRRRDLGVREPRH
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggccctgggcagcaccagcagcaccagtgatctttctctgagtgcggaggggtcaggt
aggagagctgaatcaggagactcagttctgatcacatccagcagctcccacgccgccggc
accggtggatccggggccagtcgcatcagcaccactgctccaggagcttcctccgccgta
tccgcaggtggagggggttcagcagcttcaggggtgtcaggggtgtcagggtccagggct
gccggaggggggtcctacagcatgtcctctagtttcgcgagtggtgtcaaagagggaaaa
agggaagggggtctaggtgctgtgacggtttcaacagtgacaaagtccagctacagttca
ggaggatgtggggaagcgaggagaggatcatcctcagcagtcactaactcacctgttcca
aaagagaggaagagtgtgaccaccatggcagcagctctctcagaggtctttgacgagagc
tcaagcacaaactcttctccagagtacaacaggaaggagtacaccacaacaagtgcaact
tcaagtcttgccaccagagggaggactcagagcagagagagcgagatcagagtcaggctt
cagagtgcttcccctacagcaagttggacggagctgggtgacgtgaagcgcctgctcaga
ggaaactccatcagcaccagccccactcggtcccctaacaacacgctgcccatcccccgg
aaggccagcgtggaaaccaggactctgtctgagagctccaacacagatcactatgacagc
gtttggtctggaggtttgagcagcagctacggttacaatgccaaccccaacaacatgtcc
actacctccaccctttaccagccaggagttcagaacaacctgacactgagtgctccctcc
atgaccagtggactatctgctagcagcactgttcccgtgtatggccttcagaataacctg
gccacctccagctccactgccttctctcccactggagccaacccacatatcgtttatggt
gtgcagaaaaatgtacctggcactggaattagcacaagcacagtgggacccagcagtccc
attaatgacgaggcctcgggcaaagactttaagtttgtgctgatagagaaagagaacgtg
cccgtcaagaaggagacagagcggctgatcatgaccaaagacacagggaaacagttcatg
tctgctgcgcctctcagtgctgctgccacctactctgaggactcgctgaagagagagaaa
cagaagcaatcatccagcacaatggaggaggaaactgatggtaaatctgcaactgtaaaa
gctgctacgaaagacaaagccacctacgcagagatccgagaagataaatcaggctttggc
ttctgctcctgctgcagctggtggaagtggctgctcggcctcctgctcagcctgctcctc
ctccttggcctcttcttcggactcatcgctttgggtgaagaggtgaaacgtctcaagaac
cgtgttgatgctctggaagccatcactggcactgcgtcagccaggtccagccgcttgtct
gcctcctccggcatcaacatcatcgaccccctggactcatcgtacattgaaagaagtaca
tctgggtccacccttacccactctgaaaatgttatcaaccagggatctgcagggccagga
gcaggcgcagggagcgggctgggacaggacaatgctgccctgcagagagctgtccagcag
ctggtcagggctgaacttcgctcaggtgctgtaagagaaacccttgcatactcactgaaa
ggggacagaggagatcctggacctaaaggtgatccaggcccactcggacaaaaaggtgaa
agtggctttcctggcctgccaggtcctcctgggcagctgggtcacccaggattggatgga
ccaaggggaccaaagggaagtgcaggtgaatcaggtccagagggaccacctggccagcgg
ggccgggagggaccaatgggcccccgcggagaagctggactaccaggttttggagagaaa
ggtagaaaaggatctcaaggtgatccaggacgtcctggtcctgctggtgctgctggacct
gtgggaccaaaaggtgccatgggagagcagggcgcggtggggagccctggtcttccaggt
ctaaagggtttccagggtgaagcaggagctcctggagcgaaaggtgatcgaggaacacct
gggttgctgggatccaagggtgaccagggagagaggggaccacgtggcccagtgggtgaa
ccaggacaacctggactgcaaggccctgctggaccaaagggatctaaaggaattggaggt
gacacaggttcgatgggacttcctggtgtgagaggaccacctggacttcctggagatatt
ggtcacccaggcctcactgggcttcaaggacccccgggtattgctggaaatccaggacag
cctggtggtaaaggtgaaccaggattacctgggaaagttatcatgccgattggctccgat
agtgtgaccatccctggacctccagggcctgcagggcctccaggtcctgctggagcccct
ggtctgtctggtcccattggccctgctggtaccccaggacagcctggagaacaaggagag
aaaggagagaagggagaaacggggcagaagggagagcaaggaaaacctggcgagcctggt
atcagtgtcacaagttcagaaactgtcaaactttcttcagtggctggacagcctggccca
ccaggacctccagggcctccgggccccacaggtcctcaaggtgagtctaaacagggtcct
ccaggacgcagaggttctcccggagagccaggcattggcttacctggacctccaggagag
aaaggagaacctggcagttttgtaccttcctcagaaacctttttcgctggaccaccagga
cctccaggaccccaaggccagcagggcccagaaggaccacaagggtatcaaggtgaacca
ggtcaaccaggtcttccagggagtccaggggaaccaggtgctggtctcccaggtcagcct
ggacctagtggccctcacggtttaccaggagtccctggtgcgccaggagtccctggaata
tccagtggtggctcatacagtcccggcccaccaggcctacctgggccacctggttcacct
ggttcacctggttcacctggaagagatggaagtggatctgggtcagctgatgtgggccag
tatattgcagagtaccttcagagtggtggcgtcagacagtacctggctggacctcctggg
ccccctggtcctccaggggctgcggggcaagcaggggatgggttggtggacgatgtggcc
agccgagttttagcctacatccagagagaggaagtgaggagatatgtttctggtcccccc
ggtccaccgggacctcctggagaaggcgtcagcagctacatattcaacacccaggaggtg
gccgaacgtgtgctcggcctcatgaatgacaggggggtcttaggggtccctggacctcct
ggacctcctgggtctcctgggtctcctgggtctcctggaaacattttatcaactgggtat
gaagcacttgtgggccctcaagggcctcctggtcccccaggtatcactggtccacaaggt
ccatctggaccagcaggtccaccaggcccaccaggatttggaaactacatcagttcagac
attcatgactacctccaaagtgtcgccttcagaggcccaccaggccctcctggcccccct
ggacctgaggggcccccgggtcaaatacatggactggtctcctacgccgagcatagcaat
aaaggcgctctcaaagcagaacgacaagaatacatcaatacccacggtgtgctgcgcgac
attgtgagggaatacaacagtcgtgtgttccaaggacccccagggccaccgggcccccca
ggtcccactggatacagccaatggtttggttcccatggaaacgccacagatctgttggaa
tacattaaatcatatggagccatcgtaggaccgcctgggagaccaggacagaaaggggac
gggggattccctgggcctaaaggagagagaggggaaagaggccttcctgggcccgaagga
cgccaaggagaaaaaggagaattcacactgactaaaagaaggaggagggatcttggtgtt
cgagagccgcgtcactga
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