Pempheris klunzingeri: 139223297
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Entry
139223297 CDS
T11454
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
pklu Pempheris klunzingeri
Pathway
pklu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
139223297 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pklu04040
]
139223297 (cnga1b)
Ion channels [BR:
pklu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
139223297 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Borrelia_P83
Presenilin
CAF1A_acidic
Nop14
NPR3
Sec62
CDC45
EMC3_TMCO1
DUF2207_C
Mat89Bb
PIP5K
Piezo_TM1-24
ADI
Ndc1_Nup
GmrSD_N
DUF6474
Motif
Other DBs
NCBI-GeneID:
139223297
NCBI-ProteinID:
XP_070711375
LinkDB
All DBs
Position
23:521353..536919
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AA seq
649 aa
AA seq
DB search
MAKVAPSVPSPTSTLTPPTIVLQDMEEEPGDVSDEDRDAQRDGVLFNANNSNNNEEEDEK
KKKKREKKEKKEKKEKEKQEKRERKEKKRKAKEEKEKEKEKEKEEKEKQEKEKKAKEEAP
KEISVIDPAGNTYYHWLAVITIPVMYNWTLIIARACFEELQSDYLMYWFIVDLIADLTYI
ADMVFRTRTGYLEQGLLVKDEQKLRERYMKSTQFKLDMVSMIPTDLLYAVFGFAYPEIRL
NKLFRFNRMMEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSFSKAIGFGSDRF
VYPDPADPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYIFVVTDFLVGVLIFATI
VGNVGSMITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDERE
VLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDI
GREMYIIKEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSD
LFCLSKDDLMEALTEYPDAKAILEEKGRQILMKDGLLDLEVAAQGPDPKEIEEKVDRMTS
VLDGLQTRYARLLAEHDATHSKLKHRVTRLEGKLVPPPAADAPPPTPES
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtagctccgtcagtcccgtcccccacctccacgctgaccccgcccaccatc
gtcctacaagacatggaggaggagccgggagacgtcagcgacgaggacagagacgctcag
agagacggagttctgttcaacgctaacaacagcaacaacaacgaggaggaggacgagaag
aagaagaagaagagagagaagaaagagaagaaagagaagaaggagaaggagaaacaggag
aagagggagaggaaggagaagaagaggaaggccaaagaggagaaggagaaggagaaagag
aaggagaaagaggagaaggagaaacaggagaaggagaagaaggccaaagaggaggcgccc
aaagagatctcagtgatcgatccggcaggtaacacctactaccactggctggctgtcatc
accatccctgtcatgtacaactggaccctgatcatagccagggcgtgtttcgaggagctg
cagagcgattatttgatgtactggttcattgtagacttaatcgccgacttgacctacatc
gctgacatggttttcagaacgaggacgggctacctggagcaggggctgctggtgaaggac
gagcagaagctgcgtgaacgctacatgaaaagcacccagttcaaactggacatggtctcc
atgatccccaccgacctgctgtacgccgtcttcggcttcgcctacccagagatccgcctg
aacaagctgttcaggttcaacaggatgatggagttcttccagaggacggagaccaggacg
aactaccccaacgccctccgcatctccaacctggtgatgtacatcgtcatcatcatccac
tggaacgcctgcctctactactccttctccaaggccatcggttttggctccgacaggttc
gtgtaccccgaccccgcggacccggagttcggtcgcctggtgaggaagtacgcctacagc
atgtactggtccacgctgacgctcaccaccatcggagagacgccgccccccgtggagaac
tccgagtacatcttcgtggtcactgacttcctggtgggcgtgttgatcttcgccaccatc
gtcggtaacgtcggttccatgatcaccaacatgaacgccgccagagccgacttccaggct
cgcatcgacgccatcaagcagtacatgagcttcaggaaggtaacgaaggacctggagaag
cgggtgatcaagtggttcgacttcctgtggaccaataagaaagccgtggatgagagggag
gtgctgaagtacctgcccgacaaactcagagcagagatcgccatcaacgtccacctggac
accctcaagaaggtgcgtatctttgcggactgcgaggccggcctgctggtggagctggtg
ctgaagctgcagccgcaggtctacagtcctggagactacatctgcaagaagggcgacatc
ggcagagagatgtacatcatcaaggaggggaagctcgccgtagtcgccgacgacggcatc
aagcagtttgtcgtcctgagtgatggaagctactttggcgagatcagcatcctggcgatc
aaaggcagcaaggcaggaaacaggaggacggccaacatcaggagcatcggttactccgac
ctcttctgtctctccaaggacgacctgatggaggcgctgacggagtatcccgacgctaag
gccatcctggaggagaagggcaggcagattctgatgaaggacggcctgctggacctggag
gtggcggcgcagggcccggaccccaaggagatcgaggagaaggtggaccggatgacgagc
gtgctggacggcctgcagacgcgctacgcccgcctgctggccgagcacgacgccacgcac
agcaagctgaagcaccgcgtcaccaggctggagggcaagctggtgccgccgccggccgcc
gacgccccgcccccaacacctgagtcatag
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