Pempheris klunzingeri: 139223346
Help
Entry
139223346 CDS
T11454
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pklu Pempheris klunzingeri
Pathway
pklu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139223346 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pklu03021
]
139223346 (smarca5)
03036 Chromosome and associated proteins [BR:
pklu03036
]
139223346 (smarca5)
Transcription machinery [BR:
pklu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
139223346 (smarca5)
Chromosome and associated proteins [BR:
pklu03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
139223346 (smarca5)
RSF complex
139223346 (smarca5)
WICH complex
139223346 (smarca5)
B-WICH complex
139223346 (smarca5)
NORC complex
139223346 (smarca5)
BRF complex
139223346 (smarca5)
NuRF complex (fruit fly)
139223346 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
139223346
NCBI-ProteinID:
XP_070711413
LinkDB
All DBs
Position
3:complement(9825002..9833992)
Genome browser
AA seq
1035 aa
AA seq
DB search
MSESANCVEQREEQTELEEAGGAEEKSDSSDAGKESSSDAGPDGQDASSPSSSKTKDSTP
GYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSA
GDNRHRRTEQEEDEELLNESAKTTNVCTRFDDSPSYVKTGKMRDYQVRGLNWLISLYENG
INGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAV
CLIGDRNERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKS
KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDQ
KLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSA
GKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLLPKMKDQ
GSRVLIFSQMTRMLDILEDYCMWRNYGYCRLDGKTPHEERQISINTYNEPNSSKFIFMLS
TRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIV
ERAEIKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDINSIL
ERGERKTLEMKEKLSSLGESSLRNFTMDTENNSVYTFEGEDYREKKKVITNWIEPPKRER
KANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGY
KVPRNPDMPNSAQVQKEEQGKIDEAEALTEEELEEKENLLQQGFTIWNKRDFNQFIKANE
KWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIK
KALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIR
NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKTGSAQKRKS
EGTPDGRGRRKKLKL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgcaaactgcgtggaacagcgggaagagcagactgaacttgaagaagcc
ggaggagcggaggagaagtctgattcttcagatgctggaaaagagtcctcttcagatgcc
ggacctgatggacaagatgcatcctccccctcctcatccaaaactaaagactccactccg
gggtatgaggagaaagtgcaaacagaccggaccaacagatttgagtacctgttgaagcaa
acagagttgtttgctcatttcatccaaccagccgcacagaagacccccacctctcccctg
aagatgaagccaggacgtcctcgcatcaagaaagatgagaaacagaaccttctgtctgcc
ggagacaaccgccatcggcgcacagaacaagaggaagacgaagagcttctaaatgagagc
gccaagactacaaatgtctgcacacgcttcgatgattctccctcctatgtcaaaacagga
aaaatgagagactatcaggtccgtggtctgaactggctaatttctttgtatgaaaatggc
atcaacggcattctcgctgatgaaatgggtttggggaagaccctgcagactatttccctg
ctgggttacatgaagcactacagaaacatccctggtccacacatggtgctggtgcccaag
tccaccctctacaactggatgaatgagttcaagagatgggtgccctcactccgtgcagtc
tgcctgatcggagacagaaatgagaggactgccctgatcagagacgtgctgctgcccgga
gagtgggatgtgtgtgtcacttcctacgagatgctcatcatcgaaaaggcagtgttcaag
aagttcaactggagatacctggtcattgacgaagcccacaggatcaaaaatgagaaatca
aagctgtcagaaattgtgcgagaatttaaaaccaccaaccgtttgctgctgactggaact
cccctgcaaaacaaccttcacgaactgtgggctctgctgaacttcctcctgcctgacgtc
tttaactcatcagaggactttgatgcctggtttgacacaaacaactgcttgggtgatcag
aagttggttgaacgtcttcacactgttctgcgtcctttcttgcttcgtcgtatcaaagct
gacgtagagaagactctgctcccgaaaaaagagatcaagatgtacgtgggcctgagtaag
atgcagcgagagtggtacacaaagattttaatgaaggacattgacattctgaactcggcg
ggtaagatggacaaaatgcgtctactgaacgttctcatgcagctgagaaaatgctgcaac
cacccgtacctgttcgacggggccgagccgggtcccccctacacaactgacctccacctg
gtggtgaacagtggcaagatggcggtgctggacaagctgctacccaagatgaaggaccag
ggctctcgtgtgctcatcttcagtcagatgaccaggatgctggacatcttggaggactac
tgcatgtggaggaactacggctactgtcgcctggatggcaagacgccgcacgaggagaga
cagatctccatcaacacatacaacgagcccaacagctctaagttcatcttcatgttgagc
accagggccggaggactgggtatcaacctggctacagcagatgtggtgatcctgtacgac
tcagactggaaccctcaagtcgaccttcaggccatggaccgagctcacaggattggtcag
cagaagcaagtgcgcgtctttcgtttcatcactgaaaacacagtagaggagaggattgtg
gagagggccgagattaaactgcgcctggactccatcgtcatccagcagggaagacttgtg
gacccgagcgcgaacaagctgggcaaggatgagatgctgtccatcatccgccacggcgcc
acacacgtgtttgcttccaaagagagcgagatcacagatgacgacatcaattcaatcctg
gagagaggtgaaaggaagactttggagatgaaagagaagctgtcttcactgggagagagc
tctctgaggaacttcaccatggacacagagaacaacagtgtgtacacattcgaaggagaa
gattatagagagaagaaaaaggtcattaccaactggatcgagccacccaagagagaaagg
aaagccaattacgctgtggatgcctacttcagagaggctctgcgagtcagtgagcccaaa
gcacccaaggctcctcgtcctcccaagcagccaaatgtgcaggacttccagttctttcct
ccacgtctgtttgagcttctagaaaaggaaattctgttctacagaaagactataggatac
aaggttccccgtaatccagacatgccaaattcggcccaggtgcagaaagaagagcagggt
aagatcgatgaggccgaggccctcacagaggaggaactggaggagaaggagaacctgctg
cagcagggatttactatttggaacaaacgagacttcaaccagttcatcaaagccaacgag
aagtggggaagagatgatatcgagaacattgccagagaggttgagggaaaaactccagag
gaagtcatggaatattctgctgtgttctgggagcgctgcaatgagctgcaggatatcgag
aagatcatggcccagatagagagaggagaggccaggatccagagaaggattagcattaaa
aaagcactggactcaaagattggccgctacaaggctcccttccatcagctccgtatctcc
tatggcaccaacaagggcaagaactacacagaggaggaggaccgcttccttatctgtatg
ctccacaagctgggcttcgacaaggagagcgtgtacgacgagctgcgtcagtgcatccgc
aactcaccccagttccgcttcgactggttcctcaaatccaggaccgccatggagctccag
aggcggtgtaacaccctgattacgctgatagagagagagaacatggagctggaggaaagg
gagaaggcagagaagaagaaacggggcccaaagaccggctcagcccagaaacggaagtca
gagggaaccccagacggtcgtggacgcaggaaaaagctcaagttgtga
DBGET
integrated database retrieval system
