Pempheris klunzingeri: 139223457
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Entry
139223457 CDS
T11454
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
pklu Pempheris klunzingeri
Pathway
pklu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139223457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pklu02000
]
139223457
Transporters [BR:
pklu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
139223457
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
139223457
NCBI-ProteinID:
XP_070711463
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Position
24:complement(3875896..3888075)
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AA seq
618 aa
AA seq
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MVDKIPPQQGNPLLDKFHQGSLPNGKEATKDSLHARGQWATKAEFLLAVAGQIIGLGNVW
RFPYLCYKNGGGVFFVPYLLFLVLCGVPLFLLETSLGQYTSLGGVSAWRTICPLFGGLGY
ASQVMILHGCVYYIVILAWAVFYLSHSFQAELPWSHCNNTWNTEACVQFDHRNQTANGSL
PENATSPVMEFWEREVLRLSSSLDELGPISWKLALCLAFVWLVCYFCVWKGVKSTGKVVY
LTATFPYVMLFVLLVRGATLPGATQGIIYYLKPNHTRLADPQVWMDAGTQIFFSYGICLG
SLTALGSYNKYNNNCYKDSFLLCLLNSSTSFIAGFAIFSVLGFMAEEQGVDIATVAESGP
GLAFIAYPRAVAMMPVPQLWAVCFFLMIIMLGLDTQFVSLEALMTSVTDLYPHVIRRGHR
RELLLLFVCVVCFLVGLVMVTPGGLYVFQIYDHFSCSGASLLLLSIFQSLAIGWVYGAER
FSANIRDMTGYSPLPFFKLCWKYLTPTVCTATFMFSLVHWSPLTLGKGLVAPAWASALGW
VLTFSSVSLLPIWAIYALATTPGTLPQRFQRLCSPAKNSTLALRHLPTDNSTLPYNSALP
LTEKPKELITDLIQDRKI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaaaatccccccacagcaaggaaacccactgctggacaagttccaccaaggg
agcctccccaacgggaaagaggccaccaaggacagcctgcatgctaggggccagtgggct
accaaggctgagttcctgttggcggtggcggggcagatcatcggcctgggcaacgtctgg
aggttcccatacctctgctacaagaacggaggaggtgtgttctttgtaccctacctgttg
ttcctggtgctgtgcggcgtccccctgttcctcctggagacctccctgggacagtacacc
agcctgggaggggtcagcgcctggaggaccatctgccctttatttggaggcctcggctac
gccagtcaggtgatgatcctgcacggctgcgtgtattacatcgtcatcttggcctgggct
gtcttctacctgtcccacagcttccaggcggagctgccctggtcgcactgcaacaacacg
tggaacactgaggcatgtgtgcagtttgaccacaggaaccagacagccaatgggagcctg
cctgagaatgccacttcccctgtcatggagttttgggaacgagaggtgctccgtctctcc
agcagtttagatgagctgggcccaatcagctggaagctggctctgtgtctggcctttgtc
tggctcgtctgttacttctgtgtctggaagggggtcaagtccaccggaaaggtggtgtac
ctgacagccaccttcccatatgtcatgctgtttgtgctgctggtgcgcggtgccaccctg
cctggagcgacccagggcatcatctactacctcaaacccaaccacacccgcctggcagac
ccacaggtatggatggacgcaggtacccagatatttttctcatatggaatctgtttggga
agcctcacagcgctcggcagttacaacaaatacaacaataactgctataaggactccttc
cttctgtgcctcctgaacagcagcaccagcttcatcgcaggcttcgccatcttctccgtg
ctgggcttcatggccgaggagcagggcgtggacatagccaccgtggccgagtcagggccg
ggcctcgccttcatcgcctaccccagagctgtagccatgatgcctgtgccccagctctgg
gcagtctgcttcttcctcatgatcatcatgctgggactggacacgcagtttgtgagcctg
gaggccctgatgacgtcggtgactgacctgtacccccatgtgatcagacgaggccaccgc
agagagctgctcctgctgtttgtctgtgtcgtctgcttcctggttgggctggtcatggtc
acgccgggtggtctctatgtgttccagatctatgaccatttctcctgcagtggagccagt
ctgctgctcctctccatcttccagtctctggccatcggctgggtctacggagccgagcgc
ttcagtgccaacatcagggatatgaccggctacagccccctgcctttcttcaagctgtgc
tggaaatacttgaccccaactgtgtgcactgctacctttatgttttccctggtgcattgg
tccccgctgaccctggggaaaggcctggtcgctccagcctgggcctccgcactgggctgg
gtcctcacgttctcctccgtctccctgcttcccatctgggccatctacgccctggccacc
actccgggaaccctgccacagcgtttccaacgcctgtgcagccctgccaaaaactccaca
ctggccctccgccacctccccactgacaactccacgctgccctacaactccgcgctgccg
ctgactgagaagccaaaggagctaatcacagacctcattcaggatcgtaagatctga
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