Pempheris klunzingeri: 139223675
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Entry
139223675 CDS
T11454
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pklu Pempheris klunzingeri
Pathway
pklu04140
Autophagy - animal
pklu04148
Efferocytosis
pklu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pklu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139223675 (vps16)
04148 Efferocytosis
139223675 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139223675 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pklu04131
]
139223675 (vps16)
Membrane trafficking [BR:
pklu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139223675 (vps16)
Hops complex
139223675 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
139223675
NCBI-ProteinID:
XP_070711747
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Position
24:complement(24342..35652)
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AA seq
834 aa
AA seq
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MAFITANWNPLGESFYRKTELYEMCWNLKDGLRDCLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVAITSFPWKSGPVVHLGWTVNDELLCVQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLLSNGPELYILDNTSCTAVCPVGLSPQAGSIIHMSVSFSYKYLALFTDTGHL
WTGSSLLQDKLSEVDTKTSTPPKQMVWCCRTKSQQKSVVLMWDRLLMVAGVSNDTIQFLI
EDPCVLVGELDGVRIISSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAAHEYDSNTQKSLLRAASFGKCFLTDFSPDAFVATCR
ELRVLNAIRESGVGLPLTHTQFKQITLQVLIDRLVYRRFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCVKVGDAPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLDSRLSLLQSAVDEYNKAKNE
FAAKASEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLSLGLHKQAEQVYKDFRVPDK
RYWWLKLRSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKSNNKNEAKKYVSRVTPEQK
VRAHLAVSDLEGAADAAVEHKNDSEMGAVLARCSASDRLLIDRLNRARASAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcaccgccaactggaacccgctgggagaatctttctatcgtaaaacggag
ctgtatgagatgtgctggaacctgaaggatggactcagagactgtttggtggctgcagct
ccatacggaggaccaatagctctcctccgagaacctcacagacgttctcccagctctcgt
cctcagttggagatttattctgcatctggagtcgccatcaccagcttcccgtggaagagt
ggtcctgtggtccatctcggttggacggtcaacgacgagctgttgtgtgttcaggaggac
ggatcggttctgatctacgacctgttcggttctttcaagagacacttcagcatgggccag
gaagtggtccagagtcaggtgctagaggccaaagtgttccactccccgtatggaacaggt
gtcgccatagtaactggctcctcccgcttcaccctggcaaccaacatcgatgacctgaag
ctccgcagactacctgaggtcccaggtctccaggggaagccgtcctgctgggtcgtcctc
actcaggacagacagactaaagtccttctgtccaacggacctgaactctacatcctggac
aacacgtcatgtactgctgtgtgtcctgtaggtcttagtcctcaggccggcagcatcatc
catatgtccgtatcattcagctataaatacctggctctcttcaccgacacgggacacctg
tggacaggctcctccctcctccaggacaagctgagcgaagttgacaccaaaacatcaacg
cccccgaaacagatggtctggtgttgcagaacaaagagtcagcagaagtctgtggtgttg
atgtgggacagactgctgatggtggccggagtcagtaatgacaccatccagttcctcata
gaggatccgtgcgttctggtcggcgagctggacggcgtgcggatcatcagctcgaccaat
caggagctgctgcaggaggttccgctggtctgtcaggacatcttcaagatcgcctccatg
gctcctggagcgctgctgctggaggcccaccgggagtacgagaagtcgagtcagaaggcc
gatgagtacttgcgggagatcaaggagcaaagcatgctgggagaagcagtgagacagtgt
gtggaggcggccgcacatgagtacgactccaatacccagaagtccctgctgagggcggcg
tccttcgggaagtgtttcctgacggacttcagtccggacgccttcgtggcgacctgcagg
gagctgcgggtgctgaacgccatcagggagagcggcgtggggctgccgctcacacacact
caattcaaacagataacgctgcaggtgctgatcgacaggttggtgtatcgacggttttat
ccgttggcgatagaaatctgtcgttacctgaagattccagattatcagggagtcagcaga
gtcctcaaacactgggcgtcctgcaaggtgcagcagaaggacctatcggacgaggccatc
gcccgggccgtatgtgtgaaggtgggagacgcgccgggcgtttcctactcgcacatcgcc
gctaaagcgtacgagtgtggacgcactgagctcgccatcaagctgttggacttcgaggct
cgctcgggggaacaggttcctctgttgctgaagatgaagaggagtcagctggctctcagt
aaggctgtggagagcggagacaccgacctggtgtacacggtggtgacgtacctgaagaac
gagatgaaccggggagatttctttatgaccctgaggaaccagccggtggccttgagcctc
tacagacagttctgtaagctgcaggaacaggagactctgaaggatctttacaatcaggat
gacgaccatcaggaactcgccaactactacgtgacggccagttacagggagaagaggtta
gacagccgtctgtctctcctccagagtgctgtagatgaatataacaaggccaagaacgag
tttgctgcaaaggcctcagaggacgagatgcgccttcttcgtttccaacggaaactggat
gacgagaaaggggcggggctactgggcctgtccctacaggccaccatggaggccctgctg
tctttaggactccacaaacaggcggaacaagtttacaaagacttcagggttcctgacaaa
aggtactggtggttgaagctgaggtctctggcagagaaggaggagtgggaggagttagag
aagttctcaaaaagcaagaagtctcctattggctacctggcgtttgtcgaggtctgcatg
aagagcaacaacaagaacgaggccaagaagtacgtttccagggtaacgcctgagcagaag
gtcagagctcacctggccgtcagtgacctggagggggccgcggacgctgccgtcgaacac
aagaacgactcagagatgggggcggtgctcgccagatgctccgcctctgaccgcctgttg
attgacaggctgaaccgagccagagcctccgctgccaaaaagtga
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