KEGG   Pseudomonas kermanshahensis: PZ739_01290
Entry
PZ739_01290       CDS       T08964                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pkm  Pseudomonas kermanshahensis
Pathway
pkm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pkm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PZ739_01290
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pkm02022]
    PZ739_01290
Two-component system [BR:pkm02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PZ739_01290
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_2 HTH_50 FleQ HTH_8 AAA DUF6716 HTH_24 HTH_10
Other DBs
NCBI-ProteinID: WEL55832
LinkDB
Position
complement(299601..301010)
AA seq 469 aa
MSPETLIDSQAQVILVDDDPHLRQALSQTLDLAGLKVVALADAQGLAERIEADWPGVVVS
DIRMPGIDGLQLLEQLHGRDSELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLD
SVRRALALRRLVLDNRSLRLALSDRQQLATRLVGQSPTMLRLREQIGALAGTRADVLILG
ETGAGKEVVARALHDLSSRRDGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSLDVQVKLLRMLQERVVERLGGNQLIPLDIRIIAATKEDLRQSA
DQGRFRADLYYRLNVAPLRIPPLRERGDDILVLFQHFADAASQRHGLPPHTLQPAQRALL
LRHDWPGNVRELQNVAERFALGLELALDGQAPAAATPTAAVLTGNLSEQVEQFERSLIAA
ELAQPHSSMRSLAEALGIPRKTLHDKLRKHSLNFDGGSGGHDDQEDNRP
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgagccccgagacactgatcgacagccaagcccaggtcattctggtcgacgacgacccg
cacctgcgccaagccctgagccagaccctggaccttgccgggctcaaggtggtggcgctg
gccgatgcccaaggcctggccgagcgcatcgaagccgactggcccggtgtggtggtcagc
gacatccgcatgccgggcatcgatggcctgcaactgctggagcaactgcacggccgcgac
agcgaactgcccgtgctgctgattaccggccacggcgatgtgccgctggccgtacaggcc
atgcgtgccggtgcctatgactttctcgaaaagccgttcgccagcgacgccctgctcgac
agcgtgcgacgcgccctggccctgcgccgcctggtgctggacaaccgcagcctgcgcctg
gccttgagcgaccgccagcaactggccacccgcctggtgggccagtcgccgacgatgcta
cgcctgcgtgagcagatcggcgccttggctggcacccgtgccgatgtgctgattttgggt
gagactggtgccggcaaagaggtggtggcccgcgccctgcacgacctttctagccgccgc
gacgggcccttcgtggccatcaacgccggggcattggccgaatcggtggtcgagagcgag
ctgtttggccacgaacccggcgccttcaccggtgcgcagaagcggcgtatcggcaagttc
gaattcgccaatggcggcacgctgttcctcgatgaaatcgagagcatgagcctggatgtg
caagtaaagctgctgcgcatgctgcaggagcgggtggtcgaacgcctgggcggcaaccag
ctgatcccgctggatatccgcatcatcgccgccaccaaggaagacctgcgtcagtccgcc
gaccaagggcgcttccgggccgacctgtattaccgcctgaacgtggcgccgctgcgcatc
cccccgctgcgtgagcgcggcgatgacattttggtgttgttccagcactttgccgacgcc
gccagccagcgccacggcttgccgccgcataccctgcagccggcccagcgcgccttgctg
ctgcgccacgactggccgggcaacgtgcgtgagctgcagaacgtcgccgagcgcttcgcc
cttggcctggagcttgccctcgacggccaggcgccggctgcggcgacgcccacggcggcg
gtattgaccggcaacctcagcgaacaggtcgaacagttcgagcgctcgctgatcgccgcc
gagcttgcccagccgcacagctcgatgcgcagcctggccgaagcgctgggcatcccccgc
aagaccctgcatgacaagttgcgcaaacacagcctcaattttgacggcggcagtggcggg
cacgacgaccaggaggacaaccgtccatga

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