Pseudomonas kermanshahensis: PZ739_01305
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Entry
PZ739_01305 CDS
T08964
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pkm
Pseudomonas kermanshahensis
Pathway
pkm00521
Streptomycin biosynthesis
pkm00523
Polyketide sugar unit biosynthesis
pkm00541
Biosynthesis of various nucleotide sugars
pkm01100
Metabolic pathways
pkm01110
Biosynthesis of secondary metabolites
pkm01250
Biosynthesis of nucleotide sugars
Module
pkm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PZ739_01305 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PZ739_01305 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PZ739_01305 (rfbC)
Enzymes [BR:
pkm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PZ739_01305 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WEL55834
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Position
complement(303717..304262)
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AA seq
181 aa
AA seq
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MNIIPTEIPDVLIIEPTVYGDSRGFFFEAFNAREFAKHTGVTVDFVQDNHSRSVKGVLRG
LHYQVENTQGKLVRVVQGEIRDIAVDVRRSSPTFGKWVAVHLSADNHRQLWIPPGFAHGF
SVVSESAEFLYKTTDYYNPGADRCIRWDDAELGIDWQLAGPPVLSDKDKVGVPLSEAQLL
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatccccaccgagatccctgacgtactgatcattgagccaacggtatacggt
gacagccgtggcttcttcttcgaagccttcaatgcccgcgaattcgcgaagcacaccggc
gtcaccgtggacttcgtccaggacaaccactcgcgctccgtcaaaggcgtgttgcgcggc
ctgcactatcaggtggaaaacacccagggcaaactggtgcgggtggtacagggcgagata
cgcgacattgccgtggacgtgcgcagaagttcgcccacgttcggcaaatgggtcgcggtg
cacctgtcggccgataatcatcggcaactgtggattccaccggggttcgcccacggcttc
tcggtggtcagcgaatcggccgagtttctctacaagaccacggactactacaaccctggc
gcagaccgttgtatccgctgggacgacgctgagctgggcatcgactggcaactcgcgggg
ccgccggtgctgtcggacaaagacaaggtcggcgtaccgctgagcgaggcgcagctgctg
ccatga
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