Pseudomonas kermanshahensis: PZ739_02845
Help
Entry
PZ739_02845 CDS
T08964
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pkm
Pseudomonas kermanshahensis
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkm03000
]
PZ739_02845
Transcription factors [BR:
pkm03000
]
Prokaryotic type
Helix-turn-helix
Other families
PZ739_02845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
PAS_9
PAS_4
HTH_AraC
AAA_2
HTH_23
HTH_7
HTH_22
HTH_17
RWP-RK
PAS_8
HTH_30
HTH_50
AAA
TrmB
HTH_IclR
HTH_10
HTH_20
HTH_26
DUF1492
dnstrm_HI1420
MCM
Motif
Other DBs
NCBI-ProteinID:
WEL56120
LinkDB
All DBs
Position
632132..634138
Genome browser
AA seq
668 aa
AA seq
DB search
MQSNHLSRHAQQVHTVAHGEAGAGGSDPAIARSWLRCLEDYHLDPTLIEAPVVLEHGRLL
ETRERLHQVLKIADAEMNSLHQQLSGTGHAVLLTDARGVILNCVSAPSERRIFERAGLWL
GADWSEAREGTNGIGTCLVERQALTIHQHEHFRGRHTGLTCSASPVFDPHGELLAVLDVS
SARPDVSRQSQFHTMALVNLSAKMIESCYFLRHFQQQWLLRFHLQAESVGLFSEGLLAFE
GDGRICAANQSALNLLGTVRGGVLGQPVERFFACSHDELFSRAVPGGSTVWPLQTRDGRQ
VFASLRGQARTPVWSVPLSQPQPQRAEAPGICLLDPALQNDFRRCVRVFERDVPLLLRGE
TGCGKEAFAQAVHQASQRRGKPFVAINCASIPESLIESELFGYRGGSFTGARKEGMRGKL
LQADGGTLLLDEIGDMPLALQTRLLRVLEERQVVPIGGEPQAVDVRIVSATHRDLLERVA
QGSFREDLYYRLNGLEVALPSVRERSDKGQLLDFLLRQEAQGQRVELEPSARQALLGFAW
PGNVRQMRNVLRTLVALCDNTFIGFSDLPVTFRSHAAPVGAGLPREAGNAVDGTGFAGVR
GASPLPHEEQNSLTHKRAPVRLEDAECEALLSVLEAKHWHLTRVAEHLGISRNTLYRKLR
KHGITRVG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaatcacttgagtcgccatgcccagcaagtgcataccgttgcccacggtgaa
gccggggcgggcggcagtgacccggcgatcgcccggtcctggctgcgctgcctcgaggat
taccacctcgacccgacgctgatcgaggccccggtggtgcttgaacacgggcgcttgctg
gaaacccgcgagcgcctgcaccaggtgctgaaaattgccgatgccgagatgaacagcctg
catcagcagctctctggtactggccatgcggtgctgttgaccgatgcccgtggggtgatc
ctcaactgtgtcagcgcccccagcgagcggcgcatcttcgaacgggcagggctgtggctg
ggcgccgactggagtgaagcgcgcgaaggcaccaacggtatcggcacctgcctggtcgag
cgccaggccctgaccattcatcagcacgaacactttcgtggccgccacaccggcctgact
tgctcggcaagcccggtgttcgacccgcatggcgaactgctggcggtactcgacgtgtcg
tcggcgcggcccgatgtgtcgcggcagagccagttccacaccatggccttggtcaacctc
tcggcgaagatgatcgagagctgttatttcctgcgtcattttcagcagcagtggctgctg
cgctttcatctgcaggctgagtcggtcggcttgttcagcgagggcttgctggccttcgag
ggtgacgggcggatttgcgccgccaaccagagcgcgctcaacctgttgggcaccgttcgc
ggtggcgtgctggggcaaccggtggagcggttttttgcctgcagccacgacgaactgttc
agccgcgccgtgccgggtggcagtaccgtctggccgttgcagacacgcgacggccgccag
gtgtttgccagcctgcgaggccaggcgcgtacgccggtctggtcagtaccgctcagccag
ccccagccccagcgtgctgaagcgccaggcatctgcctgctcgacccggcgttgcaaaac
gacttccgccgctgcgtgcgggtcttcgagcgtgatgtgccgctgctgttgcgtggcgag
accggttgcggcaaggaggcattcgcccaggccgtgcaccaggccagccagcgtcgcggc
aagccgttcgtggcgatcaactgcgcctcgatcccagagagcctgatcgaaagcgagctg
ttcggttaccgcggtggcagctttaccggcgcacgcaaggaaggcatgcgcggcaagctg
ctgcaggccgatggcggcacgttgttgctggacgagattggtgacatgccactggccttg
cagacacgcctgttgcgggtcctggaggagcgccaggtggtgccgattggcggcgagccc
caggccgtggacgtgcgcatcgtcagtgccacccaccgcgacctgctggagcgggtggcg
cagggcagcttccgcgaagacctgtattaccggctgaacgggctggaagtggccttgccc
tcagtgcgtgagcgcagtgacaagggccagttgctggactttttgctgcgtcaggaagcc
caggggcaacgggtggaactggagcccagtgcgcgtcaggcgttgctgggctttgcctgg
ccggggaacgtgcggcagatgcgcaatgtattgcgcacgctcgtggcgctttgcgataac
accttcatcgggttctccgacctgcccgtgactttccggagtcatgcggcccctgtgggg
gcgggcttgccccgcgaagcaggcaacgcggtggatggcaccggctttgccggtgttcgc
ggggcaagcccgctgccacacgaggagcaaaacagtctcacccacaagcgcgcgccagtg
cgccttgaggacgctgagtgcgaagcgctgctgtcagtgctggaggcaaaacactggcac
ttgacccgcgttgccgagcacctgggcatcagccgcaataccttgtatcgaaaactgcgc
aaacacggcatcacccgggtcggctga
DBGET
integrated database retrieval system
