Pseudomonas kermanshahensis: PZ739_03765
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Entry
PZ739_03765 CDS
T08964
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pkm
Pseudomonas kermanshahensis
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkm03400
]
PZ739_03765 (phrB)
Enzymes [BR:
pkm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PZ739_03765 (phrB)
DNA repair and recombination proteins [BR:
pkm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PZ739_03765 (phrB)
Prokaryotic type
PZ739_03765 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WEL56290
LinkDB
All DBs
Position
complement(828159..829601)
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AA seq
480 aa
AA seq
DB search
MQLIWLRSDLRIDDNTALSAACERGPTLALWLVSPGQWQAHDDAACKVDFWLRNLRTLRQ
SLEALNIPLLIRTVDKWDQAPQAVLDACRQHRVEGVHWNEEYGINEERRDQATRALLEQS
AIQAHSYLDQLFFRPGTVLTRSGDYFQVFSQFKKNCLEHLHRSLPALAPRVKPQSPLNIA
SDPIPDQIEGFDTPPRTLSDHWPAGEAEAQSRLTRFLDEAIDDYHHLRDLPAKPGTSQLS
AYLAAGVISPRQCLHGALACNRGEFDSGSTGIQTWINELLWREFYKHILTGYPQVSRHRA
FRTQTEALPWRDAPEDLAAWEQGRTGFPIIDAAMRQLLDTGWMHNRLRMIVAMFLSKNLL
IDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQGRFIR
HWVPELQGLDEKAIHQPVKVADLFATNSYHNPIVDLGSSRQRALEAFKGLPRRQDQGAVS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacctgcgcatcgacgacaacaccgccttgagcgca
gcctgcgaacgcggcccgaccctagccctgtggctggtcagccccggccagtggcaggcg
catgacgacgctgcctgcaaagtcgacttctggctgcgcaacctgcgcacgctgcgtcag
tcgctggaggccctcaatatcccgttgctgatccgtaccgtcgacaagtgggatcaagcg
ccacaggccgtgttggacgcctgccgtcaacaccgggtcgagggcgtgcactggaacgag
gagtacggcatcaacgaagagcgccgcgaccaggctacgcgggctctgctggaacagtca
gccatccaggcgcacagctacctcgaccagttgttcttccgcccaggcacggtcctcacc
cgcagtggtgactatttccaggtcttcagccagttcaagaaaaactgcctcgaacacttg
caccgcagcctcccggcgttagcccctcgggtcaaaccgcagtcgcccctgaacatcgcc
agcgaccccatacccgatcaaatagagggcttcgacacaccgccgcgcaccttgagcgac
cactggccagcaggagaagccgaggcgcagagccgcctgacgcgctttctggatgaggcg
attgacgactaccatcacctgcgcgacctccccgccaagccgggcaccagccagctctcg
gcttatctggccgctggggtgatctcgccccggcaatgcctgcacggtgccctggcctgc
aaccgtggcgagttcgacagcggcagcacgggcatccaaacctggatcaacgagttgctc
tggcgggagttctacaagcacatcctgacgggttatccacaggtctcgcggcaccgcgcc
ttccgcacccagaccgaagccttgccgtggcgcgatgcgcctgaagacctcgcggcctgg
gaacaggggcgcaccggtttcccgatcatcgatgccgccatgcgccagttgctggacact
gggtggatgcacaaccgcctacgcatgatcgtcgccatgtttctcagcaagaacctgctg
atcgactggcgcaaaggcgaacggcatttcatgcgccacctgatagacggagacctggcg
gccaacaacggtggctggcaatggagcgcgtccaccgggaccgatgcagtgccctacttc
cgcatcttcaacccggtttcgcagtctcagcgcttcgacccgcaagggcgattcattcgc
cactgggtaccggaattgcagggcctggatgagaaagccattcatcagcccgtgaaggtt
gcggatctttttgctactaattcgtatcacaatccaatcgtcgatctcggcagcagtcgc
cagcgtgcattggaggccttcaaaggccttccgcgccggcaggatcagggggcagtatcg
tga
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