Pseudomonas kermanshahensis: PZ739_05795
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Entry
PZ739_05795 CDS
T08964
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pkm
Pseudomonas kermanshahensis
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkm03016
]
PZ739_05795 (truD)
Enzymes [BR:
pkm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PZ739_05795 (truD)
Transfer RNA biogenesis [BR:
pkm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PZ739_05795 (truD)
Prokaryotic type
PZ739_05795 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WEL56682
LinkDB
All DBs
Position
1288079..1289137
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AA seq
352 aa
AA seq
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MTELELLGPRASGEALGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPARSISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHAALDARLEALKQHGVPNYFGSQRFGHGGGNVHDALDW
AARKALPEQRNVRSRLLSAGRSYLFNQILAARVADGSWARAQVGDLLAFTDSRSFFPATE
QECSDPRLAILDLHPTGALWGEGETPAAGATAALESAVAARQPALCHWLAQAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREVVDLVSAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgctgggcccgcgtgcatcgggtgaagcgctgggcactgcggtg
ctcaaggccgtggctgaagacttccaggtcgacgaggtgctggatatcccgctgtcgggc
cagggtgagcacctgtggctgtgggtcgaaaaacgcgacctcaacaccgaagaagcggcc
cgccgattggcccgcgccgcaggcgtgccggcccgttcgatcagctatgccggcctcaag
gaccgccaggccctgacccgtcagtggttcagcctgcacctgcccggcaaggccgacccg
gacctgtcgcgtgccgaggatgccagcctgcgcgtgctcaagcaggtgcgtcaccagcgc
aagctgcagcgtggcgcgcattcggccaatggcttcaccctgcgcctgacggccctggcg
gccgatcacgctgcactggacgcgcgccttgaggcgctcaaacagcacggcgtgccgaac
tatttcggcagccagcggtttggccatggcggcggtaatgtccatgacgcgctcgactgg
gcggcccgcaaggcgctgccagagcaacgcaatgtgcgttcgcgtttgctttcggcaggg
cgcagctacctgttcaaccagattctcgccgcccgtgttgccgacggcagctgggcccgt
gcgcaagtcggggacctgctggccttcaccgatagccgtagtttctttcccgcgaccgag
caggaatgttccgatccgcgcttggcgattctcgacctgcatcccaccggtgcgctgtgg
ggcgagggcgaaacccccgccgcaggtgccactgccgcgttggaaagcgcagtcgccgcg
cggcagccggcactgtgccattggctggcccaggcgggcatggatcacgaacggcgcatt
ctgcggctccctattggcggcctgacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgcttcgccaccgtggtggtgcgcgaagtcgtggatctg
gtgtcggcagggcagacggacagcccatgcgtattctga
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