Pseudomonas kermanshahensis: PZ739_08240
Help
Entry
PZ739_08240 CDS
T08964
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkm
Pseudomonas kermanshahensis
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkm03032
]
PZ739_08240 (topA)
03400 DNA repair and recombination proteins [BR:
pkm03400
]
PZ739_08240 (topA)
Enzymes [BR:
pkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PZ739_08240 (topA)
DNA replication proteins [BR:
pkm03032
]
Prokaryotic type
DNA Topoisomerases
PZ739_08240 (topA)
DNA repair and recombination proteins [BR:
pkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PZ739_08240 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WEL57137
LinkDB
All DBs
Position
1810793..1813402
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAGEA
PALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDR
EGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRV
VGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAKV
RFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAAS
NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPENPLV
YGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVT
VAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKPP
ARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF
SNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESAENGMRANQPTMTN
IPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESRVLL
GKHRCPICATAMDAYLLDEKHKLHICGNNPDCAGYEIEEGSYRIKGYEGPSLECDKCGSE
MQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVEMPELKCEKVDDTYVLRDGAS
GLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPEGRPAVIRYSRKTKE
QYVQSEVDGKPTGWKAFYDGNAWKVEDKR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcaaccagtacgtggtgaagtcgagtatcggccatatccgagacctccccaccagc
ggttcggccagcgctagcaaagagccggccgccaagcgtggtaaggctgcgggtgaggcg
ccggccctttcgccgaaagaaaaggcacgccgccagctggtggcacgcatgggtgtcgac
cccgaccacggctggaaggccaagtacgagatcctgcctggcaaggaaaaggtgatcgaa
gagctgcgccgcctggccaaggatgctgacaccatctacctcgcaaccgacttggaccgc
gaaggggaggccattgcatggcacctgcgcgaagccatcggtggtgacgacacccgctac
aagcgcgtggtgttcaacgaaattaccaagaaggccattcaagaggccttctcgcaaccg
ggcgagctggacatcgaccgcgtcaacgcccagcaggcgcggcgcttcctcgatcgcgtg
gtgggctacatggtttcgccactgttgtgggccaagatcgcccgtggcctgtccgcaggc
cgtgtacagtcggtcgcggtgaagctggtggtcgagcgcgagcgcgagatccgtgccttc
atccccgaagagtactgggagatccacgccgacctgggcaccgccaagaacgccaaggtg
cgtttcgaagtggcgcgcgagaaaggcgaggccttcaagccgctcaacgaagcgcaggcc
atggcagcgctggagaagctcaaggcttccagctacagcgtggtcaagcgtgaagaccgc
ccgaccagcagcaagccctcggcgccgttcatcacgtccaccttgcagcaggccgcgagc
aaccgcctgggctttggtgtgaagaaaaccatgatgatggcccagcgtctgtacgaagcg
ggttacatcacctacatgcgtaccgactccaccaacctgtcggccgatgccctggacatg
gcgcgcagctacatcgagcgcgagttcggcaagcagtacctgccggaaaacccgctggtg
tatggcagcaaggaaggcgcccaggaggcgcacgaagcgattcgtccttctgacgtcaac
acccatccgaccaagctcagcggcatggagcgcgatgcagagcgcctgtacgagctgatc
tggcgccagttcctcgcctgccaaatgccgccggcgcagtacctgtccaccagcgtcacg
gtggcggctggcgacttcgagctgcgtgccaagggccgtatcctcaagttcgacggttac
acccgcgtgctgccgcaacagagcaagcctggcgaagacgatgtgctgccggaaatggtc
cagggtgaagcgctcaagctgatccagatcgacccgagccagcacttcaccaagccgcca
gcgcgcttcactgaagccagcctggtcaaggaaatggaaaagcgcggcatcggtcgcccg
tcgacctacgcggcgatcatctcgaccatccaggaccgtgggtatgtaacgttgcacaac
cgccgcttctattccgagaagatgggcgacatcgttaccgagcgcctgtccgagagcttc
tccaacctgatggactacggcttcaccgccggcatggaagagaacctcgacgacgtggcc
cagggcgagcgtgactggaagaacgtgctcgacgagttctacggcgacttcagcaaaaag
ctgcagacggccgagtcggccgaaaacggtatgcgtgccaaccagccgaccatgaccaac
attccgtgcaaggaatgtggccgcccgatgatgattcgtaccgcctccaccggcgtgttc
ctcggttgctcgggctacagcctgccgcccaaggaacgttgcaaggcaaccgtcaacctg
gtgccaggtgacgagattgccgcggatgacgagggtgaatcggaatcccgcgtgctgttg
ggcaagcaccgttgcccgatctgcgccacggcgatggacgcttacctgctggacgagaag
cacaagctgcacatctgtggtaacaacccggattgtgcgggctacgagatcgaagagggc
agctaccgtatcaagggctacgaaggaccgagcctggagtgcgacaagtgtggcagcgag
atgcagctcaagactggccgtttcggcaagttcttcggttgcactaaccctgcgtgcaag
aacacccgcaagctgctcaaaagcggtgaggcggcgccaccgaagatggacaaggtggaa
atgccagagctgaagtgcgagaaggtcgatgacacctatgtgttgcgcgacggtgcctcg
gggttgttcctggcggccagccagttcccgaaaaaccgcgagacgcgtgcgccgctggtg
ctggagatcgtcccgcacaagcatgagatcgatccgaagtaccatttcctctgcgatgcc
ccgcagaaggacccggaaggccgcccagcggtgattcgctacagccgcaagaccaaggag
cagtacgtgcagtccgaggtcgatggcaagccgacggggtggaaggcgttctacgacggc
aatgcgtggaaggttgaagacaagcgctga
DBGET
integrated database retrieval system
