Pseudomonas kermanshahensis: PZ739_09015
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Entry
PZ739_09015 CDS
T08964
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pkm
Pseudomonas kermanshahensis
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkm03032
]
PZ739_09015
03036 Chromosome and associated proteins [BR:
pkm03036
]
PZ739_09015
03400 DNA repair and recombination proteins [BR:
pkm03400
]
PZ739_09015
DNA replication proteins [BR:
pkm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PZ739_09015
Chromosome and associated proteins [BR:
pkm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PZ739_09015
DNA repair and recombination proteins [BR:
pkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PZ739_09015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Barstar
Motif
Other DBs
NCBI-ProteinID:
WEL57278
LinkDB
All DBs
Position
1980561..1980833
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADISKATAGKALDAVIDSVTGALKAGDDVVLVGFGTFSVKERAERTG
RNPQTGNAIKIAAAKVPGFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgacgctatcgctgcatcggctgacatttccaaagctacc
gcaggtaaggctctggacgctgtgatcgactccgtaaccggtgccctgaaagcaggcgac
gacgtcgttctggttggcttcggcaccttctcggtcaaggagcgcgccgagcgcaccggc
cgtaacccgcaaaccggcaacgccatcaaaatcgctgctgccaaggttccaggtttcaag
gctggcaaaggcctgaaagacgccgtcaactaa
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integrated database retrieval system
