KEGG   Pseudomonas kermanshahensis: PZ739_10055
Entry
PZ739_10055       CDS       T08964                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K11917  sigma-54 dependent transcriptional regulator
Organism
pkm  Pseudomonas kermanshahensis
Brite
KEGG Orthology (KO) [BR:pkm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pkm03000]
    PZ739_10055
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkm02044]
    PZ739_10055
Transcription factors [BR:pkm03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PZ739_10055
Secretion system [BR:pkm02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PZ739_10055
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 Mg_chelatase HTH_30 AAA_16 AAA_2 AAA HTH_8 AAA_19 AAA_22 AAA_7 Sigma70_r4
Other DBs
NCBI-ProteinID: WEL57473
LinkDB
Position
2232630..2233694
AA seq 354 aa
MSLITHPNARELTKSVRATVLVFKDPRSQELLSRIERLAPSEANTLIIGETGTGKELVAR
HIHQLSRRGREPFVAVNCGAFAETLVESELFGHEKGAFTGATSNKAGWFEAANGGTLFLD
EIGDLPLNMQVKLLRVLQEREVVRLGSRTPIPINVRLVAATNVNLADAVVAGHFREDLFY
RLHVATIRLPPLRERPGDILPLAEFFIEEHCRRLGYERASLSPDAERKLLAHSWPGNIRE
LENAIHHALLVCRYQVVAPADLHLVDMRPQGAAQVYATQANAPAALAAPPNLESALLALF
EQNVPNLYEHIEETVFRAAYRYCHGNQLQTGRLLNISRNIVRARLEKIGELSKA
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgtcgctgatcacccaccctaatgcccgagagctgaccaagtcggtacgtgccaccgtg
cttgtgttcaaggaccctcgctcccaggagctgctcagccgtatcgagcgcctggcgccc
agcgaggccaataccctgatcatcggcgaaactggaaccggcaaagaacttgtcgctcgc
cacatacatcagctgagccgccgtggccgcgaaccgtttgtggcggtgaactgcggtgcc
tttgccgaaaccctggtggaaagcgaactgttcggccatgagaaaggggcgttcaccgga
gccacctcgaacaaagccggctggttcgaagcggccaatggcggcacgctgtttctcgac
gagattggggacctgccgttgaacatgcaggtgaagttgctgcgggtgctgcaggagcgc
gaagtcgtgcggctgggctcgcgtacaccgatcccgatcaacgtgcgcctggtggccgcg
accaacgtcaacctggccgacgccgtggtggcggggcattttcgcgaagacctgttctac
cgcctgcacgtcgccaccatccgcctgccaccgctgcgtgagcggcccggcgacatcctg
cccttggccgaatttttcatcgaagagcattgccggcgcctgggttatgaacgtgcgtcg
ctcagcccggatgccgagcgcaaattgctggcccacagctggccgggcaacatccgcgag
ttggaaaacgcgatccaccatgccttgctggtatgccgctaccaggtggtagcgcccgca
gacctgcacttggtggacatgaggccgcagggtgcggcccaggtgtatgccacgcaggcc
aacgccccggccgcgctcgcggcgccgcctaaccttgaaagcgcgctgttggcgttgttc
gagcagaacgtgccgaacctgtatgagcacatcgaggagacggtgttccgggcggcgtat
cggtattgccacgggaaccagctgcagaccgggcggttgttgaacatcagccgcaacatc
gtgcgggcgcggctggagaagattggcgaattgtcgaaggcatga

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