Pseudomonas kermanshahensis: PZ739_10080
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Entry
PZ739_10080 CDS
T08964
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pkm
Pseudomonas kermanshahensis
Pathway
pkm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PZ739_10080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkm03021
]
PZ739_10080
Transcription machinery [BR:
pkm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PZ739_10080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
DUF2774
HTH_28
HTH_24
DUF6031
HTH_38
HsdM_C
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WEL57478
LinkDB
All DBs
Position
2237973..2238482
Genome browser
AA seq
169 aa
AA seq
DB search
MSCADPSLQKTVHTLYAEHHPWLCGWLRNKLGCVEHAADLAQDTFIRVLTLRKAAELREP
RAYLSSIARSLMIDMFRRRAVEQAYLETLAARPEQVEVSPEARTLIIEALMEIDRLLDGL
GARSREIFLMAQLDGLSYVEIGRRLDISVTTVKKHAVRALTHCLMLAED
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgctgacccttccctgcaaaaaaccgtgcataccctctacgcggagcaccat
ccctggctgtgcggttggctacgcaacaagctcgggtgtgtcgagcatgcggcggacctg
gcccaggacacgttcatccgcgtgctgaccctgcgcaaggccgccgagctgcgcgagcca
cgggcttacctctcgagcatcgcccgtagcctgatgatcgacatgttccgccgccgtgct
gttgagcaggcctatctggagacgcttgccgcccgccccgagcaggtcgaagtctcgccc
gaggcgcgcacgttgatcatcgaagcgttgatggaaatcgaccgcctgctcgacggcctg
ggcgcccgcagccgggagatttttctgatggcccagctggatggcttgagctatgtcgag
atcgggcggcgcctggacatttcggttaccaccgtcaagaagcatgcagtgcgggcactg
acccattgcctgatgctggctgaggactga
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