Pseudomonas kermanshahensis: PZ739_18150
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Entry
PZ739_18150 CDS
T08964
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkm
Pseudomonas kermanshahensis
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkm03032
]
PZ739_18150
03400 DNA repair and recombination proteins [BR:
pkm03400
]
PZ739_18150
Enzymes [BR:
pkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PZ739_18150
DNA replication proteins [BR:
pkm03032
]
Prokaryotic type
DNA Topoisomerases
PZ739_18150
DNA repair and recombination proteins [BR:
pkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PZ739_18150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
WEL53751
LinkDB
All DBs
Position
4059832..4060854
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPRTLHYIDDSQPGLSRRRWRDRFIYLDTDGQRVRDADTLARIAALVIPPAYSDV
WICADPQGHLQATGRDARGRKQYRYHEQWRELRDQHKYGRMLAFAQALPKLRSQLETHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNQSYGLTTLRNRHVKVQGGTIRFQFRGK
RGVEHDVTLHDRRLANLLKRCMELPGQALFQYLDEEGQRHSIGSSDINQFLQALTGADFT
AKDYRTWAGSSLALNLLRPLAWEPETEAKRQVAAIVKQVATRLGNTPAVCRRCYIHPAVL
EHFALGRLASLPRKRNRKGLDPEEVALLLFLQALEEQDDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactgccccctgccccgcaccctgcattacattgacgatagccaacctggcctg
agccgacggcgctggcgcgaccgcttcatctatctggatactgacgggcagcgggttcgc
gacgccgacaccctcgcacgcattgccgcgctggtgattcctccggcctatagcgacgta
tggatctgcgccgacccgcaaggccatctgcaagccaccggccgcgacgcccgtggccgc
aagcagtaccgctaccatgagcaatggcgcgaactgcgcgaccagcacaaatacgggcgc
atgttggcatttgcccaggcactgccgaaattgcgctcgcaactggagacccacctggcc
agaccgggcctggaccgggaaaaggtgatggcactggtcgtcagcctgctggaccacacc
ctgatccggatcggcaaccagcgttacctgcgcgacaaccagtcgtacgggttaaccacg
ctgcgcaaccgtcacgtcaaggtgcaaggcggcaccatccgcttccagttccgcggcaag
cgcggcgtcgagcacgatgtcaccttgcacgaccggcgcctggccaacctgctcaagcgc
tgcatggagctgccgggccaagcgctgttccagtacctcgacgaagaggggcaacgccac
agcatcggttccagcgatatcaaccagttcttgcaggcgctcactggcgctgactttacc
gccaaagactaccgcacctgggctggcagcagccttgcgctgaacctgctcaggccgctg
gcctgggagccggaaaccgaagcgaagcgccaggtcgctgccatcgtcaagcaggtcgcc
acgcgcctgggcaataccccggcggtatgccggcgctgctacatccacccagccgtgctg
gaacactttgccctcggccgcctggccagcttaccccgcaaacgtaatcgcaaaggcctg
gatccagaggaagtggcgctgttgttatttctgcaggcgttggaggaacaggacgatcat
tga
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