Pseudomonas kermanshahensis: PZ739_21035
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Entry
PZ739_21035 CDS
T08964
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pkm
Pseudomonas kermanshahensis
Pathway
pkm00061
Fatty acid biosynthesis
pkm00071
Fatty acid degradation
pkm01100
Metabolic pathways
pkm01212
Fatty acid metabolism
pkm02024
Quorum sensing
pkm04146
Peroxisome
Module
pkm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PZ739_21035 (fadD1)
00071 Fatty acid degradation
PZ739_21035 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PZ739_21035 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PZ739_21035 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pkm01004
]
PZ739_21035 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pkm04147
]
PZ739_21035 (fadD1)
Enzymes [BR:
pkm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PZ739_21035 (fadD1)
Lipid biosynthesis proteins [BR:
pkm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PZ739_21035 (fadD1)
Exosome [BR:
pkm04147
]
Exosomal proteins
Exosomal proteins of breast milk
PZ739_21035 (fadD1)
Exosomal proteins of breast cancer cells
PZ739_21035 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
WEL54298
LinkDB
All DBs
Position
complement(4677013..4678710)
Genome browser
AA seq
565 aa
AA seq
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MIEHFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYD
LPRAVRFNDTLALGKGQPVTEANPQPNDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPSEANQVGTIGIPVPSTLCKIIDDSGNELPLGEVGELCIKGPQVMKGYWQ
REDATAEILDSAGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRYIEFRDTLPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacatttttggaaggataaatacccagccgggattacggcggaaatcaatcct
gacgaattccccaatatccaggcggtactcaagcaatcctgccaacgctttgccgacaaa
ccggcctttagcaacctgggcaagactatcacctatggtgagctgtatgcgctgtcgggg
gcgtttgccgcctggctgcagcaacacaccgacctgaaaccgggtgatcgcattgccgtg
caactgccaaacgtcctgcaatacccggtagcggtattcggcgccatgcgtgcagggctg
atcgtggtcaacaccaacccgctgtataccgcgcgggagatggagcaccagttcaacgat
tccggtgccaaggcgctggtgtgcctggccaacatggcccacctggccgaaaaagtagtg
cccaagactcaggtcaagcatgtcatcgtcaccgaagtggccgacctgctgccgccgctc
aagcgcctgctgatcaacagtgtgatcaagtacgtcaagaagatggtgccggcctatgac
ctgccgcgtgccgtgcgcttcaacgacaccctggcgctgggcaagggccagccggtcacc
gaggccaacccgcaacccaatgatgtcgccgtgctgcaatacaccggcggtaccacgggc
gtggccaagggcgcgatgctgacccaccgcaacctggtggccaacatgctgcaatgccgg
gcgctgatgggctcgaacctgcatgaaggctgcgagatcctgatcacgccgctgccgctt
taccacatctatgcttttaccttccattgcatggcaatgatgctgatcggcaatcacaac
gtgctgatcagcaatccgcgtgatttgccggcgatggtcaaagagctgagcaagtggaaa
ttcagcggcttcgttggcctcaacaccttgttcgtcgccctgtgcaacaacgaggggttc
cgcgcgctggacttctctgcgctgaaaatcaccttgtctggcggcatggccctgcaattg
agcgtggccgagcgctggaaggccgttaccggttgcgccatctgcgaaggttacggcatg
accgaaaccagcccggtggccgccgtcaacccgtccgaggccaaccaggttggcaccatc
ggtattccggtgccttcgacgctgtgcaagatcatcgacgacagtggcaatgaactgccg
ctgggcgaggtgggtgagctgtgcattaagggcccgcaagtgatgaagggctactggcag
cgcgaggacgccaccgccgagatcctcgacagcgcgggttggctcaagaccggcgacatc
gcgttgatccagccggacggctacatgcgtatcgtcgaccgcaagaaggacatgatcctg
gtctccggtttcaacgtgtaccccaacgagctggaagacgtgctggccggcctgccaggt
gtgctgcagtgtgcggccatcggcgtgccggacgaaaagtcgggcgaagtgatcaaggtg
ttcatcgtggtcaagccgggcatgaccgtgaccaaggagcaggtgatggagcacatgcgt
gccaacgtcaccggctacaaggtgccgcgctacatcgagttccgcgatacgttgccgacc
accaacgtgggcaagatcctacgccgtgagttgcgcgatgaagagctgaagaagcaaggg
ctcaagaagatcgcttga
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