KEGG   Pseudomonas kermanshahensis: PZ739_22145
Entry
PZ739_22145       CDS       T08964                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pkm  Pseudomonas kermanshahensis
Brite
KEGG Orthology (KO) [BR:pkm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkm03400]
    PZ739_22145
Enzymes [BR:pkm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PZ739_22145
    5.6.2.6  RNA 3'-5' helicase
     PZ739_22145
DNA repair and recombination proteins [BR:pkm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PZ739_22145
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WEL54505
LinkDB
Position
4941399..4943852
AA seq 817 aa
MAASTDLANAWFALRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAFAV
ASSARQPAPLQVLWVTPMRALAADTARALQAPLDELGLNWSVGVRSGDTGSAERARQARR
LPSVLITTPESLTLLLTRAQAHDDFANLRLVVVDEWHELLGNKRGVQLQLALARLRHWHP
PLLTWGLSATLGNLQHARDVLLPGDGLLVQGRQDKQMQVDTLLPDAIERFPWAGHMGLKM
LDQVSRELDSSASSLVFTNTRAQAELWYQALLEARPDWAGLIALHHASLSRDTRDWVERN
LKQGTLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRPSRVTLVP
THSLELVEAAAARHALLAGQIEARRSPQLCMDVLVQHLVSMALGSGFRPEQLLAEVRSTW
AFRALRDSQWQWALDFVCHGGNSLSAYPDYQRVEPHADGVWRVASERLARRHRMGIGTIV
SEASLQLKYWSKGGGGKSLGSVEEAFIARLRPGDSLVFAGRVLELVRVENMTAYVRRSTS
RKAAVARWNGGRMPLSSELADALVEQLDAAAHQRYEGPEMRAVRPLLALQASWSALPTTR
TLLAETLRSRQGSHLFLYPFAGRMANLGLANLIAWRVSQVQPLSVSIAVSDYGFELLSPS
AVDWATHLPSALSTEHLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQKSTRQIQ
ASSGLFYEVFRKHDADNLLLGQARDEVLREELEIERLHRQLAKLGQLQLDLRELRRPGPL
AFTLLVEGMRETLSTEKLADRIARMVADLEKVAGNNA
NT seq 2454 nt   +upstreamnt  +downstreamnt
atggccgcctccaccgacctcgccaacgcctggttcgccctgcgcggctggaaacccttc
gcctttcaacgccgtgtctgggcggccgtcgaacgcggcgagtctgggctgttgcacgcc
agtaccggcgccggcaaaacctacgccgtctggctggcggccctgcgcgcgttcgccgtt
gccagctcagcccgccagccggcccccttgcaggtgctgtgggtgacgcccatgcgcgcc
ttggccgccgacaccgcgcgtgccttgcaagcgccgctcgatgagctgggcctgaactgg
agcgtgggcgtgcgcagtggtgacactggcagcgccgaacgcgcgcgacaggcccggcgc
ctgcccagcgtattgatcacgacccccgaaagcctgaccctgctgctgacccgggcacag
gcccatgacgacttcgccaacctgcgcctggtggtggtggatgaatggcatgagctgctg
ggcaacaagcgtggggtgcagttgcaactggccctggcacgcctgcgccactggcacccg
ccgctgctgacctggggcctctcggccaccctcggtaacctgcagcacgcacgcgacgtg
ctgttgccaggcgatgggttgctggtgcaaggccggcaagacaagcaaatgcaggtcgat
accctgctgcccgacgcgatcgagcggttcccctgggcagggcacatgggcttgaagatg
ctcgatcaagtcagccgggagctcgacagcagcgccagcagcctggtcttcaccaacacc
cgcgcccaggctgaactgtggtaccaggcgctgcttgaggcacgccccgactgggctggc
ctgatcgccctgcaccacgcttcgttgtcccgcgacacccgcgactgggtcgagcgaaac
ttgaagcaaggtacgcttaaagccgtcatctgcacctccagcctggacctgggcgtggat
ttcctgcccgtggagcgggtgctgcagatcggctcggccaaaggcatcgcccgcctcatg
cagcgcgccggtcgctccgggcacgcaccggggcgcccctcgcgggttaccttggtgccc
acccacagcctggaactggtggaggccgctgccgcccggcatgccctgctcgccgggcag
atcgaggcccggcgctcaccacagctgtgtatggatgtgctggtgcaacacctggtcagc
atggccttgggcagtggctttcgccccgagcagttgctggccgaggtacgcagcacctgg
gccttccgcgcgttgcgcgacagccagtggcagtgggcgctggacttcgtctgccacggc
ggcaactcgctcagcgcctaccctgactaccaacgtgtcgagccccacgccgacggggtc
tggcgggttgccagcgagcgcctggcacggcgccaccgcatgggcatcggcaccatcgtc
agcgaggccagcctgcagctcaagtactggagcaaaggcggcggtggcaagtcgctgggc
agtgtcgaggaagcgttcatcgcccgcctgcggcctggtgatagcctggtcttcgcaggg
cgcgtgctggaactggtgcgcgtcgagaacatgaccgcctacgtccgccgcagcacctcg
cgcaaggccgctgtggcccgctggaatggcgggcgtatgccgctgtccagcgaactggcc
gatgccctggtcgaacaactcgatgccgccgcccaccagcgttacgaaggcccagaaatg
cgcgccgtgcgcccattgctggccttgcaggcaagctggtctgcactgccaacaacccgc
acgctgctggctgaaacgttaagatcacgccaaggctcgcacctttttctgtacccgttc
gccgggcgcatggccaacctcggcttggccaacctgattgcctggcgggtcagccaggtg
caaccgctttcggtctcaatcgccgtcagtgactatggctttgagttgctcagcccaagc
gccgtggactgggccacgcatttgcccagcgcgctctcgaccgagcacctgctagaggat
gtactggccagcctgaacgcaggcgagatggcgctaaggcgctttcgcgagatcgcccag
atcgccggcctggtgtttggcggctacccggccgcgcaaaagagcacccggcagatccag
gcgtcgagcgggctgttctacgaggtgtttcgcaagcacgatgccgacaacctgctgctg
ggccaggcacgggacgaagtactgcgcgaagaactggaaatcgagcggctgcaccggcag
ttggcgaagctgggccaactgcagctggacctgcgtgaattacgccgccctgggccgctg
gcttttaccttgctggtggaaggcatgcgcgaaaccttgagcacggaaaaactcgcagac
cgcattgcgcggatggtcgcagacctggaaaaagtagcgggtaacaacgcatga

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