Pseudomonas kermanshahensis: PZ739_23210
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Entry
PZ739_23210 CDS
T08964
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pkm
Pseudomonas kermanshahensis
Pathway
pkm00470
D-Amino acid metabolism
pkm00550
Peptidoglycan biosynthesis
pkm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PZ739_23210 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PZ739_23210 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkm01011
]
PZ739_23210 (murD)
Enzymes [BR:
pkm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PZ739_23210 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pkm01011
]
Precursor biosynthesis
Amino acid ligase
PZ739_23210 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DUF5335
Motif
Other DBs
NCBI-ProteinID:
WEL54712
LinkDB
All DBs
Position
complement(5179139..5180485)
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AA seq
448 aa
AA seq
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MSLIASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELDTLRRDYPQVEVRCG
ELDVDFLCRANELYVSPGLALSTPALQQAAARGVALSGDIELFARHAKAPIIAISGSNAK
STVTTLVGEMAAKAGKRVAVGGNLGTPALDLLSDEVELYVLELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGAHQVVVNRQDALSRPLPVEGRPCWSFGLNQPD
FKAFGLREVDGEKYLAFEFQNLMPVRELKIRGSHNHSNALAALALGHAAGLPFAPMLDAL
REFGGLAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGADIAGKLVLIAGGDGKGAD
FAALREPVARFCRAVVLLGRDAERLAEALGEGVPHVRVKTLEDAVEQCAALAQPGDAVLL
SPACASLDMFKNFEERGRLFAQAAGGLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactgatcgcttccgaccaattccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgagccggggcattgcctttgcggtcgccgacacccgcgag
caaccgccggaactggacaccctgcgccgtgattacccgcaggtggaagtgcgctgtggc
gagctggacgtggacttcctgtgccgcgccaacgaactgtacgtgagcccgggcctggcc
ttgtccaccccggcgctgcaacaggctgcggcacggggtgtggccctgtcgggcgacatc
gagctgttcgcccgccatgccaaagctccgatcatcgccatcagcggctccaacgcaaaa
agcacagtaaccaccctggtcggcgaaatggccgccaaggcgggcaagcgcgtggccgtg
ggcggtaacctcggcacgccagccctggacctgctgagcgatgaggtggagctgtatgtg
ctggagctgtcgagcttccagctggaaaccacagaccagctcaacgccgaagtcgccacc
gtgctgaacatcagcgaagaccacatggaccgctacagcggcctgccggcttatcacctg
gccaagcaccgcatcttccggggcgctcatcaggtggtggtaaaccgccaggacgcgttg
agccggccattgccggtggaaggccggccgtgctggagctttggcctgaaccaaccggac
ttcaaggccttcggcctgcgtgaggtcgacggcgagaagtacctggcgttcgaattccag
aacctgatgcccgtgcgcgaactgaaaattcgcggttcgcacaaccacagcaacgccctc
gcagccctggccctcggccatgccgcaggcttgccgtttgcaccgatgctcgacgccctg
cgcgagtttggcggcctggcccatcgttgccagtgggtgcgcgagcgcaatggtgtcaat
tggtacgacgactccaaggccaccaacgtcggtgctgcgctggcggccatcgaaggcctg
ggcgcggatatcgccggcaagctggtgttgatcgccggcggtgacggcaaaggtgctgac
tttgctgcgctgcgggagccagtggcgcgcttctgccgtgcagtggtgctgttgggccgt
gatgccgagcgcctcgccgaagcgttgggcgaaggtgtaccgcacgttcgggtcaagacc
ctggaagacgccgtcgagcagtgcgccgccctggctcagccgggtgatgccgtgctgttg
tcgccggcctgcgccagcctcgacatgttcaagaactttgaagaacgcgggcgcttgttc
gcccaagcggcgggagggctggcatga
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