Pseudomonas kermanshahensis: PZ739_24015
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Entry
PZ739_24015 CDS
T08964
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pkm
Pseudomonas kermanshahensis
Pathway
pkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PZ739_24015 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkm03400
]
PZ739_24015 (recD)
Enzymes [BR:
pkm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PZ739_24015 (recD)
DNA repair and recombination proteins [BR:
pkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PZ739_24015 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
NAT10_TcmA_helicase
Viral_helicase1
AAA_22
SH3_13
UvrD-helicase
AAA_16
SLFN-g3_helicase
T2SSE
AAA_28
AAA_17
TraI_hel_assoc_N
nSTAND3
AAA_5
NTPase_1
PhoH
Motif
Other DBs
NCBI-ProteinID:
WEL54864
LinkDB
All DBs
Position
complement(5344569..5346644)
Genome browser
AA seq
691 aa
AA seq
DB search
MSRTLTDLLPTPLHAEHLLALAPQRVSADLLQLLDRWVERGWLRALDRAFVSFLEERAPG
SDPLLLLAAALASHQLGHGHVCLDLQQTLAEPDFALSLPPEGDALIGPLLLPSQLLADLD
LQAWRQRIAASPLVAAGDTPGQQARPLVLSGERLYLRRYWNYERRIDQNLRQRLSQDEAA
PADLPARLAQLFDAGALAGQVDWQKLACALATRAGFSIITGGPGTGKTTTVVRLLALLQA
PAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVSAAVRGQIPTEVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPRARLILLGDKDQLASVEAGA
VLGDLCRDAEDGCYSPATQAWLEQIGGQSLEGSGLKAGDAQRNPLAQQVVMLRFSRRFGE
GSGIGQLARLVNRQESHAARNLLAMPPPDVNGLALKNEHDRAFDRLLLDGLNRGAEGPQG
YRSYLRTLGRYRPAPATAFDDPLWEQWASRVLHSFEDFQLLCAVRRGAWGVEGLNERVAR
VLHNAGLIDAQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDERGEPLLRVAFPRNDG
NGGVRFVLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGITRAKH
CFSLIEPRQGIFEEAVSRKVRRISGLMLEQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaaccctcaccgacctgctgcccacgccgctgcacgccgaacacctgctggcc
ctggcgccgcagcgtgtcagcgctgacctgctgcaactgctggaccgttgggtcgagcgt
ggctggctgcgagccctcgaccgcgcgttcgtgtcgtttctcgaagagcgtgccccgggc
agcgaccccttgctattgctggcggctgccctggcgagccatcagctgggccacggccat
gtctgcctggacttgcagcaaaccctggccgaaccggactttgcgctgtcgctgccgcca
gaaggcgacgccttgatcggccccttgctgctgccttcgcaactgcttgcagacctggac
cttcaggcctggcgccagcgcatcgctgccagcccactggtggccgcgggcgacacgcca
ggccagcaggcacggccgctggtgctcagcggcgagcgcctgtacctgcgccgctattgg
aactacgaacggcgcatcgaccagaacttgcgccagcgcttgagccaggatgaagccgca
ccggctgacttgccggcgcgcctggcacagctgttcgacgcgggtgccctggccggtcag
gttgattggcaaaagctggcgtgcgccctggcgacccgcgccggcttcagcatcattacc
ggcggccctggcaccggcaagaccaccacggtggtgcgcctgctggccttgctgcaggcc
ccggcggtggagcagggcaggcctctgcgtattcgcctggccgcgccgaccggcaaggcc
gctgcgcgcttgaccgaatccattggccagcaggtcgagcgcctgcaagtcagcgcagcc
gtgcgcgggcagatccccaccgaggtcagcaccgtgcaccggctgctgggcagccgcccc
gggtcgcggcatttccgtcatcacgcgggcaacccattgccattggacgtgctggtggtc
gacgaagcctcgatgatcgacctggagatgatggccaacctcctcgacgccctgccaccc
cgcgcacggctgatcctgctgggtgataaagaccagttggcttcggtcgaggcgggggcg
gtattgggcgacctgtgccgggatgccgaagacggctgttactcacccgcgacccaggcg
tggctagagcagattggtggccagtcgctggaaggcagtggtctcaaagccggtgatgcg
cagcgcaatccgctggcccagcaggtggtgatgctgcggttttcccggcgcttcggcgaa
ggcagcgggattggccagttggcgcggctggtcaaccgtcaggaatcccatgcggcgcgc
aatctgctcgcgatgccaccgccggatgtcaatggcctggcgctgaagaacgaacatgat
cgagccttcgaccgtctactgctcgacggcctcaaccgcggcgcagaagggcctcaaggc
tatcgcagctaccttcgaacactgggccgctatcggccggctccggctaccgcgttcgat
gacccgctctgggaacaatgggcaagcagggtgctgcacagtttcgaggacttccagctg
ctgtgcgcggtacgcagaggcgcatggggtgtcgaaggccttaacgaacgggtggcgcgg
gtgctgcacaacgccgggctgatcgacgctcagcagccttggtatgagggccggccggtg
ctggtgacccgtaacgattatggcctgggcctgatgaacggcgacatcggcatcgccttg
cgcctgcccgacgagcggggcgagcccctgctacgggttgcctttccgcgtaacgacggc
aacggtggggtacgtttcgtcttgccaagccggctcaacgaagtggaaaccgtgttcgcc
atgacggtgcacaagtcccagggctcggagttcagccataccgccctggtgctgccggac
gcccttaacccggtgctgaccaaagagcttgtgtacaccggcatcacccgggccaagcat
tgcttcagcctgatcgaaccacggcagggcatcttcgaggaggcggtgtcgcgcaaggtg
cggcgcatttccggcctgatgctcgaacaggtctga
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