Pseudomonas kermanshahensis: PZ739_24025
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Entry
PZ739_24025 CDS
T08964
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pkm
Pseudomonas kermanshahensis
Pathway
pkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PZ739_24025 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkm03400
]
PZ739_24025 (recC)
Enzymes [BR:
pkm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PZ739_24025 (recC)
DNA repair and recombination proteins [BR:
pkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PZ739_24025 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WEL54866
LinkDB
All DBs
Position
complement(5350315..5353797)
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AA seq
1160 aa
AA seq
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MVNTTALHPGFMIVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEEGDLGGCGIAAAIDVQLPGSFMWQLYRRVLGRDEIPEVSLLDKAPLTWRLMRLLPAL
IERPHFEPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWAAGEHILNTARGE
RKPLPPGNRWQAELWRALLDDVGEQGMAQSRAGVHQRFIERIASLEQAPVGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPLLL
DDQSLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYRGVFSEGRIDLFSEASPTTLLNQL
QDDILELRPLAETRERWPQVDLAQDRSMRFHVAHSPQREVEILHDQLLARFSADPTLRPR
DVIVMLPAIDTYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGREPLLIALEHLLKLPDSR
FAVSEVLDLLDVPAVRARFGIRESDLPTLHRWIEGAGIRWGLNAEQRASLGLPEGLEQNS
WRFGLRRMLLGYAVGVGEGCDGIEPYDEIGGLDAALIGPLVALLDALEVACQALAQPATV
TEWGERLNALLQVFFLAEGEHDEFLLMQLQDLRDAWLEVCETVGLQDALPLTVVREAWLS
GLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQQPLDFDLMASDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHVAAGWRLAG
ADDAPGQGPDERLLHALTQEHPLQPFSPRYFQKGSPLFSFAHEWQLLHRQGQDATQVEPA
LPPYVDDEALSLTQLNDFLRHPVRHFFSQRLKVFFEALEAPTPDEEPFVLDTLQRYSASE
TLLNAALADPANAEQALQVQARRLQACGVLPLAGFGALLQADLIQPLPDLLQRHRQLLQR
WPHLVEGALPVHYEQGTHRLEGWLGRVYQSDDQSLLSITTVPNTISAGRNNYKWHRLIAP
WVMHLAACAAGYPLNSALVASDLTLLLAPLPRDQAAHLLGDLLVARQAAMNAPLPVAAKT
AFAWLAQDDADKALAAAARAYEGDERNSFGERSESIALARQFRDFAALTADETFEGWCET
LYRPLFNAPWQALGNPESGA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacaccaccgccctccatcccggcttcatgatcgtacatggcaaccgcctcgac
gatttgcgcagcttggtggtgagctggatgcgccgttacccgttagcgcccctggaaaac
gaaatcgccctggtgcagagcaacggcattgcccaatggctaaaactggcgctggctgaa
gaccctgaagaaggtgacctaggcggctgtggtattgccgccgcgatcgatgtgcagctg
cctggtagcttcatgtggcagctttaccggcgagtgctgggccgcgatgagatccccgag
gtttccctgctcgacaaggcgccgctgacctggcgcctcatgcgcttgcttccggcgttg
atcgagcgcccgcatttcgagcccctgcgccgttttctcaccgacgatagcgacctgcgc
aagcgttaccagcttgccgagcgcctggccgacctattcgaccagtaccaagtctaccga
gccgattggctcaaggactgggctgccggcgagcacatcctcaataccgcccgtggcgag
cgtaaacccttgccccctggcaatcgctggcaggccgaattgtggcgggcgctgctggac
gatgtcggcgagcagggcatggcgcaaagccgtgcaggtgtgcatcaacggttcatcgag
cgtatcgccagcctggagcaggcacctgtcggcctgccatcgcgcgtgatcgtgttcggt
atctcctccctgccagcgcaagcattggaggctttggcggggcttgcccggttcagccag
gtactgctttgcgtccacaacccgtgtcgccatcactgggccgatatcgtcgccgacaaa
gacctgctgcggcatcagtacaaacgccaacaacgcaagcaaggcatgccgcttctgctg
gatgaccaatcgctacaccagcatgcccatccgctgctggccgcctggggcaagcagggc
cgtgattacatcaacctgctcgacagctatgacgacccgggcagctaccgcggcgtattc
agcgaagggcgcatcgacctgttcagcgaagcttcgccgaccaccctgctcaatcaactg
caggatgacatcctcgaactgcgcccactggccgaaactcgcgaacgctggccgcaagtc
gacctcgcgcaggaccgttcgatgcgcttccatgtcgcgcacagcccgcaacgcgaggtg
gaaattctccacgaccagttactggcccgcttcagcgccgaccctacgctgcgcccgcgc
gatgtgatcgtgatgctgccggcaatcgacacttatgcaccccatatccgcgccgtgttc
ggtcagttgcagcgcaacgacccgcgctacatcccgttcaccctcaccgaccaaggccag
cgcggtcgcgagcccttgctgattgccctggagcacctgctcaagctgccagacagccgt
tttgcggtcagtgaagtgctcgacctgctggacgtgccggcagtacgggcccgcttcggt
attcgtgaaagcgatttgcccacgcttcatcgctggattgaaggtgccggtatccgctgg
ggcctgaacgccgagcaacgggccagcctcggcttgcctgaaggcctggagcagaacagc
tggcgtttcggcctgcggcggatgttgttgggttatgccgtaggcgtgggtgaggggtgt
gatggtattgaaccctatgacgaaatcggtggcctcgatgcggcactgatcggccccttg
gtagccctgctggacgcccttgaggtggcctgccaggcactggcacagccggcgacagta
accgagtggggcgagcgcttgaatgccttgctgcaggtgtttttcctggctgagggtgag
cacgacgagtttctgctgatgcagctgcaggacctgcgcgacgcctggctggaagtgtgc
gaaaccgtcggcctgcaagacgcgctaccgctgacggtggtccgcgaagcgtggttgtcg
gggcttgaccaaggcaagctgtcccagcgttttctggcggggtcggtgaacttctgcacc
ctcatgcccatgcgcgccatcccgttccgcgtggtctgcctgctgggcatgaacgatggt
gactacccccgcgcccagcagccgctggacttcgacctgatggccagcgactaccgccca
ggtgatcgctcgcgccgtgaagatgaccgttacctgttgctcgaagcgctactgtcggca
cgggatcagctttatgtcagttgggtcgggcgcagcatccgcgacaacagcgagcgcccg
gcctcggttctgatcggccagttgcgtgatcatgtggctgccggctggcgtttggccggt
gcagatgacgcgccaggccaagggccggatgagcgcttgctgcacgccttgacccaggag
cacccgctgcagccgttcagcccgcgctacttccagaagggcagcccgttgttcagcttc
gcccatgaatggcagctgctgcatcggcaagggcaggacgccacgcaggtcgagccggct
ttacctccttacgtcgacgacgaagcactgagcctgacgcagctgaacgattttcttcgc
cacccggtgcggcacttcttcagccagcgcctgaaggtgttcttcgaggccctggaggcg
ccgacgccggatgaagagccgttcgtcctcgatacgctgcaacgctacagtgccagtgaa
accctattgaatgccgcgctggccgacccggcgaatgccgagcaggccttgcaggtgcag
gcacgccgcctgcaagcgtgtggcgtgttgccgcttgccggttttggcgcactgttgcag
gccgatctaattcagccgctgcctgacctactgcaacgtcatcgtcagttgttgcagcgt
tggccacacctggtcgaaggcgcattgcctgtgcattacgaacagggcacgcaccggctg
gaaggctggctaggccgggtgtaccagtctgatgatcaaagcttgctaagcatcaccacc
gtcccgaacaccatcagtgcagggcgcaacaactataaatggcaccggttgatcgcaccc
tgggtcatgcacctggctgcctgcgctgcaggttatccgctgaacagtgcactggtggcc
agtgacctgaccttgctcttggcacctttaccgcgagaccaggcggcgcacttgctcggc
gacctgttggttgcccgccaggccgccatgaatgcgccgctgccggtggcggccaaaacg
gccttcgcctggctggcccaagacgatgccgacaaagcgctggccgcggctgctcgcgcc
tatgagggcgatgagcgcaacagttttggcgagcgcagcgagagcatcgccctggcgcgg
cagttccgtgacttcgccgcgctcaccgccgacgaaacctttgaaggttggtgcgaaacc
ctgtaccgccccttgttcaacgcaccctggcaggccctgggcaacccggagagtggcgca
tga
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