Pseudomonas kermanshahensis: PZ739_24225
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Entry
PZ739_24225 CDS
T08964
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pkm
Pseudomonas kermanshahensis
Pathway
pkm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PZ739_24225 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkm03019
]
PZ739_24225 (pnp)
03016 Transfer RNA biogenesis [BR:
pkm03016
]
PZ739_24225 (pnp)
Enzymes [BR:
pkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PZ739_24225 (pnp)
Messenger RNA biogenesis [BR:
pkm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PZ739_24225 (pnp)
Transfer RNA biogenesis [BR:
pkm03016
]
Prokaryotic type
tRNA degradation factors
PZ739_24225 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
KH_N4BP1_2nd
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
WEL54899
LinkDB
All DBs
Position
complement(5398294..5400399)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKTFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTSDAVLMVESEAQELTEDQMLGAVLFAHDEFQAVIQAVKELAAEAAKPTWDWKPAVAN
TELFNAIRAEFGEAVSQGYTITVKADRYARLGELRDQAIAKFSGEEGQPSASEVKEIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagacattccagttcggtcaatcgaccgttactctcgaaacgggc
cgtattgcccgtcaagccaccggcgcagtgctggtcactgtagacaacgacgtcaccgtg
ctggtgaccgtggtcggtgccaagcaagccgatccaggcaagggtttcttccctctgtcg
gtccactaccaggaaaagacctacgccgccggcaagatcccaggtggtttcttcaagcgt
gaaggccgtccttccgagaaagagaccctgacctcgcgcctgatcgaccgtccgatccgt
ccgctgttccctgaaggcttcatgaacgaagtccaggtcgtctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattccgttcgaaggcccgatcggcgccgcccgcgttgctttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaactggctgcctcgagcctggacatggtcgtt
gccggtacctccgacgccgttctgatggttgaatcggaagcccaagagctgaccgaagac
cagatgttgggcgctgttctgttcgcccacgacgaattccaggctgttatccaggctgtc
aaagagctggccgccgaagctgccaagccgacctgggactggaaacctgccgttgccaac
accgagctgttcaacgccatccgcgctgaattcggcgaggctgtttcgcagggctacacc
atcaccgtcaaggccgaccgctacgcgcgcctgggcgagctgcgcgatcaggcgatcgcc
aagttctccggtgaagaaggccagccatcggcttccgaagtcaaagaaatcttcggcgaa
atcgaataccgcaccgttcgcgagaacatcgtcaacggcaagccgcgtatcgatggccgt
gacaccaagaccgttcgcccgctgaacatcgaagtcggcgtcctgccgaagactcacggt
tcggcgctgttcacccgtggcgaaacccaggccctggtcgttgcgaccctgggtactgcc
cgtgacgcccagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgttctcggttggcgagtgtggtcgtatgggcggtgctggccgtcgc
gaaatcggccatggccgtctggctcgtcgctcggtccaggccatgctgcctgccgctgac
gtgttcccgtacaccatccgtgtggtttcggaaatcaccgagtccaacggttcgagctcg
atggcttcggtctgcggtgcttccctggcactgatggacgcgggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggtcaaggaaggcgagaaattcgcggtcctgacc
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggttgccggtaccgcc
aaaggcgttactgcactgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccttgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcatcggccagtcgcgtaccgagctgtcggccaacgctccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggcaaaggcggcgccaccattcgcgccatc
tgcgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcagctgaagcagcccgtcagcgcatcctgggcatcactgccgaggcc
gaaatcggcaagatctatgtgggtaaggtcgagcgcatcgttgacttcggtgccttcgtc
aacatcctgcctggcaaagatggcctggtgcacatctccatgctgagcgatgctcgcgtc
gagaaagtcaccgacattctgaaagaaggtcaggaagtcgaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaagacgttgccgcggccaaggcctccggc
gtctaa
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