Plasmodium knowlesi: 7320177
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Entry
7320177 CDS
T01094
Name
(RefSeq) ATP-dependent RNA helicase DDX42, putative
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7320177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
7320177
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
7320177
Spliceosome [BR:
pkn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
7320177
Complex B
7320177
Complex C
U2 SnRNP specific factors
7320177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF7826
Motif
Other DBs
NCBI-GeneID:
7320177
NCBI-ProteinID:
XP_002258833
UniProt:
A0A384KHK9
LinkDB
All DBs
Position
8:complement(<871162..>873578)
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AA seq
736 aa
AA seq
DB search
MNGPSGDGSPEQCANAKEGESGDQEMDPLDEFMMEINKVLEEEKQKTESREKDAEEAAKS
APQKGSNFTRTEKEPLRGNTPKCVGNYFVRETKSHVERKSNHTLDNHTEEDGGHDDDSLD
DNDATADIYEFLEKKNEELASEKRRLEAHAGKGTHDRNMMSDDSPDDGDGFFQNGRESNK
ENEIIENDINYDEVHLDHFNKDIFVTDNSITDFTLEESVEYKKKNNITTIGFSVPKPLFS
FLQLKNVIDKEVLENMYNLSISILSPIQSIVIPIFLSGRDFIASSRTGSGKTLSFIISLI
IHLVNYKKIEKEKKGKNFHKESDPPEEEHTVTSPPGAIPTSLPSKQGKGNASSHALILTP
TRELCVQIYDQINKLCLNKLKSCILFNGINYKNAYDDIHKGVDIIIANVKTLINFVNKTY
LSLTKIKYVILDEFDRLFSKQFVHSVTSILRNIRPDAMKGFFSSTFSEQSCELAKPYLNK
KFIIIKVGENNILIDKKFYILEDHAKYDCLLNCVHACAPSGQGFIFCNSKKNVMTLYEKL
KREISLRHISFDYIYGDIDQTERLYKLDCLKKKKTQVMISTDLMARGIDIIDLNFVINYD
CPNDIFVYVHRIGRCSRMNNRGQAITFIQPSEKRIAFLIYSHLNNKKEKVDQTLEDFIRR
NNLHNDVQMKKVKRKMNDSIFDVSQKKAKHPGDNKSILADFAFKKMSAPSRSGEDALKNL
KVFTPNDVLTSSDEDY
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaacggccccagtggagatggctccccggagcaatgcgcgaacgcaaaggagggtgaa
tcgggggatcaggaaatggaccccttggacgaattcatgatggaaataaataaagtcttg
gaggaggagaagcaaaagacggagtcgcgagaaaaggacgcagaagaagcagccaagtcg
gcaccccaaaagggtagtaattttacacgtacggagaaggaaccccttaggggaaatacc
cctaaatgtgtaggaaattactttgttagggaaaccaaatctcatgtcgaaagaaaaagt
aatcacactttggataaccatacagaagaggatggtggacacgatgacgatagtctggat
gacaacgacgccacagcggacatttatgaatttttggaaaaaaaaaatgaagaattggca
agcgagaaacgtcgcttagaagcacacgcaggaaaaggaacccacgacaggaacatgatg
agtgatgattctccagatgatggggatggcttcttccaaaacggaagagagagcaacaag
gaaaacgaaataattgaaaatgatataaactacgatgaggtgcatctggaccactttaat
aaagacatctttgtcacagataacagcatcacagattttactttggaagaaagtgtcgaa
tacaaaaaaaaaaataacatcacaactatcggattcagcgttccgaaaccccttttttcc
tttttgcaattaaaaaatgtgatagacaaggaggtgttggagaatatgtacaatttgtcc
ataagcatcttgtcacccattcagagtattgttatcccaatctttttaagtggtagggat
tttatagccagtagcagaactggttcaggaaaaaccctctccttcatcatatctttgatt
atccatttggtaaattacaaaaaaattgagaaggaaaaaaaaggaaaaaatttccacaaa
gaaagcgaccctccggaagaggaacacacagtgacatccccacccggggcaataccaaca
tcattaccttccaaacaaggtaaaggtaacgcctcatcacatgctctaatactaactccg
acaagagaattgtgtgtgcaaatatatgaccaaattaacaaactctgtttgaacaaatta
aaatcttgtatcctgttcaacggaataaattataaaaatgcatatgatgacattcacaaa
ggagtggacattataattgcaaatgtaaaaacgttaatcaattttgttaataaaacgtat
ctttcccttactaaaataaagtatgtcattttggacgaatttgaccgactcttttcgaag
cagtttgtccactctgtcacatccatacttaggaatataaggccggacgcgatgaaggga
tttttttcctccaccttttcggagcaatcgtgtgaactggcaaagccctacttaaataaa
aaattcatcatcatcaaggtgggcgagaacaacattttaattgataaaaaattctacatt
ttagaagaccatgctaagtatgactgtttactcaattgtgtgcatgcttgcgccccaagt
ggccaaggatttattttctgcaatagcaaaaaaaatgtgatgactttatatgaaaaattg
aaaagggaaatctcgctcagacacatatcgtttgattacatttatggagacatagaccag
acggagaggctatacaaattagattgcctgaaaaaaaagaaaactcaagttatgatcagc
acggacctgatggcacgcggcatcgacatcatcgacttgaacttcgtcatcaactacgac
tgccccaacgatatcttcgtctacgtgcacaggataggcagatgttcccggatgaacaat
cgcggacaagccataacgttcatacagccatccgaaaaaagaattgctttcctcatatac
agccacttaaataacaaaaaggaaaaagtggatcagacgctggaagactttattcgcagg
aacaaccttcataatgatgtccaaatgaaaaaagtgaaaagaaaaatgaacgactccatc
tttgatgtgtcgcagaagaaggcaaagcatcccggagataacaaatctattttggctgac
tttgcctttaaaaaaatgtccgcgccatccagaagtggtgaagacgctttaaaaaatttg
aaggtctttacgccaaatgatgttttgacatcctccgatgaggactactga
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