Plasmodium knowlesi: PKNH_0105200
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Entry
PKNH_0105200 CDS
T01094
Name
(RefSeq) DNA mismatch repair protein MSH2, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PKNH_0105200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_0105200
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PKNH_0105200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
MutS_II
zf-C2H2_REST
AAA_23
Motif
Other DBs
NCBI-GeneID:
7318553
NCBI-ProteinID:
XP_002257548
UniProt:
A0A5K1UAP7
A0A384KEE3
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Position
1:294562..297129
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AA seq
855 aa
AA seq
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MSEDILSKVGDPHNGKSDVGSFSKESADADSPSIDTNNAGSPTVMSFNMETRNNIKYAGI
CIYNMNTNEFSLCEYIENEHFTILESLLIQCRPTCFLYLSNNDKLDDKRIKLILSLCEVK
YRELGRADFYNTCSMENDLSKLLKPTEDVKNCISFFKLKLACRSFTSIVKHMNLLNDYSA
TNKCLLTNYNINRYLKLDRAATIALNVHEEHMLGEKKTSCKRGTNNTLYTFLNKCKTKIG
ERKLLQWVMHPIRDEAKINERLDMVSILKEDGVMRSMIQSDYLRKISDLDVIIKKLKIVN
STTGEGKEENVARRIGGGKVKGGKNMCTIEDLVKMYDSVVVSKRIYYCLNDYAGKYRNTL
EKNFLTPLKEVLISLDSFVKLIELTVDFDELSNNNFLISRKFDEQLEKLASEKDETLRMI
KEHRQEVEDDINNLKGISKKNNAKEDIKLVDCNINTFLFRAVKKDISSIQQRKKTYFQVR
MNKSEILFTTNKLKELCKRYEYILQDYNMAQEQLASKAIQVASSYWDPTTKLSKLIAQID
VLSAFAFVSASSISVYVRPIAETNGQVLQLIESRHPLVESNFLLMNNFIPNDVHMNKTDK
RLNIITGPNMGGKSTYIRQIALICLMAQIGCFVPCTYARIPIFSQIMCRVGSSDIQLKGI
STFFSEMIEISAIIKNADENTLVIIDELGRGTSTYEGFGISWAVAQYILKKIKCFCLFAT
HFHEMSNLEDEYQGATNNHVGAKIDPEKKKISFLYEIKKGYADKSYGVHVAQIAKLPQNV
IDKAFEKSKELESVENRHYFRSKMTGTNQDDVQKRDMQNKTYDLLRDIFSATDEEQFISH
VGQHTTALTEILHEM
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagatattttatccaaggtgggagacccccacaatgggaaatcagatgtgggg
agtttttcaaaggagagtgcggacgctgactcccctagtatagatacgaacaacgcagga
tcccccacagtaatgagctttaacatggaaacaaggaacaacatcaagtatgcaggaatc
tgcatctataacatgaatacgaatgagttttccctctgtgaatacatcgaaaatgaacac
ttcaccattttagaatcattgttgatacagtgcagacctacgtgcttcttatacctctcc
aataacgataaactggacgataaaaggatcaaactaatactaagtttgtgtgaagtaaaa
tatagagagttaggaagggctgatttttacaacacatgttcaatggaaaatgatctaagt
aagttattaaaaccaacagaagacgtgaagaattgtatctccttttttaaattgaagttg
gcttgtcggtcattcaccagtatcgtcaaacatatgaaccttctcaatgattacagtgct
accaacaaatgtctactaacaaactacaatataaatcgatacctaaaacttgacagagca
gcgacgatcgctctgaatgttcatgaagagcatatgctaggagaaaaaaagacaagctgc
aaaagagggaccaacaacactctctacacgttcttaaacaaatgcaaaacaaaaataggg
gaacgaaagcttctacagtgggtaatgcacccgataagggacgaagcgaaaattaatgaa
aggctagacatggtcagcatattaaaagaggacggagtgatgagatccatgatacagtcg
gattatcttcgaaaaattagcgacctcgatgttataattaagaaattaaaaattgttaac
agtaccacgggtgaagggaaggaagaaaacgtcgcgcgtagaatagggggaggaaaagtt
aaggggggaaaaaacatgtgcactattgaagatttggtaaaaatgtacgattctgtagtg
gtgtcgaaacggatctactactgcttaaacgattacgcaggtaagtataggaacacgttg
gagaagaactttctgacgccactaaaggaggtgctaatcagcctggactccttcgtaaag
ctaatcgaactaacggtagacttcgacgaattatcaaacaacaactttttaatatctcgt
aaattcgacgaacagctagaaaaactagctagcgaaaaggatgaaacgttaagaatgata
aaggagcacagacaagaagtggaagacgacattaataatctcaaaggaattagtaaaaag
aataacgccaaggaagacataaaattggtcgactgtaatattaatacttttctatttaga
gcagttaaaaaggatatatcttcaattcaacagagaaaaaaaacttacttccaagtgagg
atgaataaaagtgaaatactttttactacaaacaaactgaaggaattgtgcaaaaggtat
gaatacatattgcaagattataatatggcgcaggaacagctagctagtaaggctatccag
gtagcttcatcctactgggaccccacaacaaaattgtcgaaactgatagcacagattgac
gtactgagcgcattcgcctttgtcagcgcatctagtatttcggtttatgttagacctatt
gcggagactaacgggcaggtactacaactcatagaatcacgacaccccttggttgagtcc
aattttctcttaatgaataattttattccaaatgatgtacacatgaataagacagacaaa
cgattgaatattatcacgggccccaatatgggaggaaaaagtacgtacataagacagata
gccttaatatgcttgatggcgcaaattgggtgcttcgtcccttgcacatatgctagaata
cctattttttctcagattatgtgccgagtgggttcatcggatattcaacttaaaggcata
tcgacttttttttccgagatgatagaaatttcagccattataaagaatgcagatgagaat
acccttgtgattatagatgagttgggaagaggtacctccacgtacgaggggtttggtatc
agctgggctgtcgctcagtacattctgaagaaaataaaatgcttctgcttatttgcaact
catttccacgaaatgtctaacctggaagatgaataccaaggggctactaacaatcatgtg
ggcgctaaaattgatccagaaaaaaaaaaaatttccttcctctatgaaatcaagaaaggc
tatgctgataagagctacggagtacatgtggctcagatagccaaactgccacaaaacgtt
atcgacaaagcctttgaaaaatccaaggaattagaatcagttgaaaataggcactacttt
cgaagcaaaatgacgggaactaatcaggacgatgtgcagaaaagggacatgcaaaacaaa
acctacgatttactgcgcgacattttctccgcaacagatgaggagcagttcatttcgcat
gtcgggcagcataccactgctttgacggagatccttcacgagatgtag
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