Plasmodium knowlesi: PKNH_0115500
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Entry
PKNH_0115500 CDS
T01094
Name
(RefSeq) DNA repair and recombination protein RAD54, putative
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PKNH_0115500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_0115500
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
PKNH_0115500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
CxC6
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
7318503
NCBI-ProteinID:
XP_002257645
UniProt:
A0A5K1VNU6
A0A384KFZ1
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All DBs
Position
1:complement(717796..720954)
Genome browser
AA seq
1052 aa
AA seq
DB search
MRKFTGNVKRNRDDSPERTCITLVRATLLPILSIDKNEKTTLFHPFKNPLPGFVSDKSLY
VKKTLGAKVRRTGWINLTNCIPRRSEGAEPDEQKENEIKDFVPLILYEDENNKIEVDPIL
AQFLREHQREGVTFVFECLMNLRDEKISGCILADDMGLGKTLQSISVLYTLLKQGINKKP
AVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNAKEKILSKLEGFKYDYKSTVIIC
SYECFRINNESLDKSSIDMIICDEAHRLKNDKTKTYMSIYNLSARKRLLLSGTPIQNDLS
EFFALISLCNPDLFDDTILFRKKYANPILIGRDKDATEKEQQIASERLAELSTITNKFIL
RRTNNLLSKVLPVKYLINIFIKLNPIQEALYMLFLKDKRILKNDQSTNRVNVLINIKKLE
KICNHPLLLNANDIKDVGQVSFAKLIEEAAKELEKKPERGAKRANARSGGTSPGGAGAAG
KLSPENNTQGDRECNRDRDRDRDRDRERDRDRRRAVEMDYDKPVKKLLEECRKDTHRSYY
NMSCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCRENSYKFVRLDGGINIKKR
HKVINDFTHSNDIFIFLLSSKSGGCGINLISSNRLVLLDPDWNPANDKQALARVWREGQK
KICYIYRFFCTGTIDEKVYQRQISKDGLSSMIVTNTNLCKDQLSDENVKKLFNYRMNTLC
ETHDNIECTRCTIKNCTEKNEENFSEQLEDFEEEDVNTWAHHQSVETVPDEILVKAVKAA
TDYKINDMNNFPVLKKLSDLFVTFAMSCKIEFRDDLIKQKAQKQAELKSLTGHSAAAEGR
DVRGESGADDDEDDEADVEDDDEEDEEEEDEDDEADGENVEVNGGDRAVAGEPPKRADKT
RKQGYQHKLMEIMEYQLERRKEKAQGAGDDEEEPAWATSTSFHGKDKTKKEDKTKREDGA
KREDANQQPSREMQPIQKKDGKISSKGKSKSYEEVVGQEEDSASMRVTRNMSHKNLIELL
SQDEESKVTLLSMSEDADASVENVSTDSSYLI
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagttcaccgggaacgtaaagcgtaaccgggatgacagccccgaaaggacgtgt
atcacgttggtgcgcgcaacgttgctacccatcctgagcatcgacaaaaatgagaagacg
acgctgtttcacccttttaaaaatccgctccctgggttcgtgagcgacaaaagcctatat
gttaagaaaactctgggcgcaaaggttaggcgtacaggatggataaaccttaccaactgc
atcccaaggagatctgaaggagcagaaccggatgagcagaaggagaacgaaataaaggac
tttgtaccactaatcttgtatgaggatgaaaacaacaaaatagaagtagatcccatttta
gctcagttcctgcgggaacaccaacgggaaggagttacctttgtcttcgaatgcttaatg
aacctaagggatgaaaaaataagtggatgtatcttggcagatgatatggggttaggaaaa
acactccaaagcatttctgtgttgtatacactgctaaaacaagggatcaataaaaagccc
gctgttagaaggtgcctgattctatgcccagctagcttaattaataactggaacgatgaa
ataaataaatggctacctggtagatgtaacgtgacttgcgttaacgacaatgcaaaagag
aaaatactaagcaagttagaaggatttaaatatgattataaatccactgtcatcatatgt
tcatatgaatgcttccgtattaacaacgaatccctagacaagtcctccatagatatgata
atatgtgatgaggcacatcggttaaagaacgacaagaccaagacctatatgagcatttat
aatttgagtgctaggaagaggcttcttctctctggtactccaatacaaaacgacctaagt
gaatttttcgctttgatttctttatgcaatcctgatctctttgacgataccattttgttt
agaaagaaatatgctaaccccatcttaattggaagagataaagacgcaacggagaaagaa
caacagatcgcgtcggagagattagccgaactgtcaaccataacaaataagttcatcctc
agaagaacaaacaatctactctccaaagtactacctgtaaaataccttattaacatcttt
attaaattgaatccgatacaagaagctttgtatatgctttttttaaaagacaagagaata
ttgaaaaatgaccagagcacgaacagagtgaatgtacttatcaatataaaaaaattggag
aagatatgcaaccatcctctccttcttaatgctaatgatataaaggatgtcggacaggtg
tccttcgctaagctcattgaggaggccgcgaaggaattggagaagaagccagagcggggt
gccaaacgggcaaatgcacgtagtggaggaactagcccaggtggtgcaggtgcggcggga
aaactttctccagaaaacaacacacagggggaccgggaatgcaatcgggatcgagaccgt
gatcgagaccgtgatcgagagcgcgatcgggaccgtcgaagggctgtggaaatggattat
gacaaaccggtgaaaaagctcctcgaggaatgcaggaaagatacgcacagatcctattac
aacatgtcctgcaaatttcagttgctacacttcctcctaaaaacgattaaacagaacacc
acagataaggtagtcatcgtaagtaattacacacaaactttagactacatggaaattcta
tgtagagagaattcgtacaaatttgtccggctagatggtggaatcaacataaaaaaaagg
cataaggttattaatgatttcacacactcaaacgacatttttatatttcttctttcttct
aaatctggagggtgcggtatcaacctgatcagttcgaatcgtttggttctgttggacccg
gactggaaccctgctaatgataaacaggctctagccagagtatggagagaagggcaaaag
aagatctgctacatctatagattcttctgtacaggtaccatcgatgaaaaggtatatcaa
agacagataagtaaggatggactgtcctccatgattgttaccaatacgaatctatgcaaa
gatcaactatccgacgagaatgtgaagaaactctttaattacagaatgaatactctttgt
gagacacatgataatattgaatgcactaggtgcactattaaaaactgcaccgagaaaaat
gaagaaaacttctcggagcagttggaagattttgaagaagaggatgtaaacacctgggca
caccaccaaagtgtagaaactgttcctgatgaaattctagtaaaggctgtcaaggccgct
actgattacaagataaacgacatgaacaattttcccgttttgaagaaattatccgatctg
tttgttacctttgccatgagctgtaaaattgagtttcgggacgacttgattaaacaaaag
gcgcagaagcaggcagagctcaagtcgctcacagggcactccgccgcggcggaggggcgt
gacgttcgcggggagagcggtgcagatgacgacgaggacgacgaagctgacgtggaggat
gacgatgaagaggatgaggaagaggaggatgaagatgacgaagcggacggggagaatgta
gaggtgaatgggggcgaccgagcagtggcaggggaaccccccaaacgcgccgacaaaacg
cgcaaacaagggtatcaacacaaacttatggagattatggagtaccaactggagcggaga
aaggagaaggcccagggggcgggagacgacgaagaggaacctgcgtgggctacgagcacc
tcctttcatgggaaagacaaaaccaagaaggaggacaaaacgaagagggaggacggagcc
aagagggaagatgctaatcaacaaccatcgagggagatgcaacctatccaaaagaaggac
gggaaaataagtagcaaaggaaagtccaagtcatacgaggaggtcgtgggccaagaggaa
gattccgcttccatgcgagtcacgcgaaacatgagccataaaaacttgatagaacttctg
tcgcaggatgaggaatccaaggtgactcttctctccatgtcggaggacgctgacgcctcc
gtggagaatgtaagtacggatagttcgtacttgatataa
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integrated database retrieval system
