Plasmodium knowlesi: PKNH_0200300
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Entry
PKNH_0200300 CDS
T01094
Name
(RefSeq) SICAvar, type II
Organism
pkn
Plasmodium knowlesi
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Gene cluster
GFIT
Motif
Pfam:
SICA_alpha
SICA_C
SICA_beta
Flavi_E_stem
Tfb4
Motif
Other DBs
NCBI-GeneID:
7318653
NCBI-ProteinID:
XP_002257676
UniProt:
A0A5K1U1C4
B3KZE4
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Position
2:complement(26465..30162)
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AA seq
936 aa
AA seq
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MDEFEYFAEFIQKWLAQRGANNMKAEVLLQRVKEKVKDMLDDMVERADHEEKLCNQQGQD
GQPILKDPKEKNLCKILIRLFYCIARLRQRGEGGGAKKTWIWEKIVMKDPTEEHVQDYLR
CIIGKILIVKILAAQCDPSRVVQIVKGAIGENIEKNNAQEEHNKCKGMDFKSLSIGQKFF
WAEIRGSIEEDTKEEGETIKELIKQEGCKNGEEEKLKNIADLLGLSDGSQLQHLSTDSNT
WSSGALAKALCYIQKGKQGIHDIEGIFKGMHDQKDRKDQGLVTRSGGSPGGISASIHDEC
EQFEDTLSSRPSSSVSSVDASPVSSGAVGPNGGAGGAQTTAPAATEAQAQLSPAPSTPTS
DSSSSSSSSSSSSSSYSGAEPTAPGGGGGGGSSGGGSGGSLPAGNAGQGPGQGPGPPQQP
PPPPPPQQQQPPLVVPPAPVPAPFNGGGTGSGTPPTAAGAAAPGSPARAGGAEGAGVLGG
LVPGAGGVVPGVPKVGGVPGIGTPAAAPATGTPPGLGGAAGAGDPGGVAGVGTPAAEEPS
GAVTTTSNGPSAGQIFRAVGRGISNILGSIFSNALSPLVNITTVPSGLLDSVSRSAGPVI
KQAAEAQEAAKAEAAAKAEAAAKAQEAAKAEAAAKAEAAAKAQEAAKAEAAAEAAPAPVN
GGSADSGTSPTSHSGTAAAPGPAAGGDGTGGGGGGSSGSGSGGSTSTGAGQGPGQSPDSL
APLPPPPPPPQPQPQPPPVAPAAAAAAAPAKVPDGGGVSSLGGVSGAGAIGRPHRTPKAV
GTPPRPKVVEWDIRNVKDVIIPYIPIIPVVLGVSVFGFLFFKYFGFSGRQKRRSRRAPQI
PRSPPPLEEHMEKGALTISYAPSQYYMVRRRHPLFSAERERAKKHILKGISEKTVIHVHL
EALNEYKNQEPNYGSPPLMDKVDFLQIIVEEFMGSA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatttgagtactttgcagaattcatacaaaaatggttagcccagagaggagca
aataatatgaaagcggaggttttattacaaagagtaaaagaaaaggtgaaagatatgctc
gacgatatggtggaaagagcagaccacgaggagaaactctgtaaccagcagggccaggac
ggacaaccaatattgaaggatccgaaggagaaaaatttgtgtaaaattctaatcagatta
ttctactgcatagctcgattaagacaaaggggggagggaggtggagcgaagaaaacgtgg
atatgggaaaaaatagtgatgaaggatccaacggaggaacatgtacaagattatttaaga
tgtataataggaaaaatacttatcgtaaaaattttagcagcacaatgtgatccaagtaga
gtggttcaaattgtgaagggggcaataggcgagaacatagagaagaataatgcacaggag
gaacataataaatgtaaaggaatggattttaaaagtttaagcattgggcagaaatttttt
tgggcagaaataagggggtccatagaggaggatacgaaggaggaaggggaaactattaag
gaattaataaagcaagaaggatgtaaaaatggcgaagaggaaaaattgaagaatattgca
gatctactcggcttaagtgatgggagccagctgcagcacttgagcactgatagtaatacg
tggtcaagtggagcattggccaaagcgctatgttatatacagaagggtaagcaaggaatt
catgacatagagggaatatttaagggaatgcatgatcagaaagacagaaaagatcaggga
ctagtaacaaggtctgggggaagtccagggggcatcagtgcaagtattcatgacgagtgc
gaacaatttgaggacactttatcatcaagaccctccagttccgtctcctctgtggacgca
tcaccagtctcgtcaggggctgtaggtcctaatggtggagccggaggagcacaaacaaca
gctcccgcagcaactgaagcccaggcgcaactctcaccagcaccctccactccgacgtca
gattcgagttcctcttcctccagtagttcaagttccagttccagttactctggagccgaa
cccacagctcctggtggtggcgggggaggtggatcctctggaggtggtagtggtggcagt
ttacctgctggtaatgctggtcaaggaccaggtcaaggtcctggtcccccacaacaacca
ccccccccacctccgccacaacaacagcaacctcctcttgtcgttccaccagcccctgtt
cccgctccttttaatggtggaggtactggttctggtacacccccaaccgcagcaggggct
gctgctccaggatctcctgctagggctggtggtgctgaaggggccggggtactgggtggt
ttagtaccaggtgctggtggggttgtacctggtgttccaaaggtaggtggtgtcccgggg
attggtactccagcagctgcacctgcgactggtactcctcctggtctaggtggtgctgct
ggtgctggtgatccaggtggtgttgctggtgttggtactccggcggcggaagaaccgagt
ggtgctgtgactacaacaagtaatggaccttctgctggtcaaatatttcgcgctgtagga
agaggaatttctaacatattgggctcaatattttcaaatgcactgtccccccttgtaaat
atcaccacagttccctccggccttctcgattcagtttcccgttcagctggtcccgttata
aagcaagctgcagaagctcaagaagctgcaaaagctgaagcagctgcaaaagctgaagca
gctgcaaaagctcaagaagctgcaaaagctgaagcagctgcaaaagctgaagcagctgca
aaagctcaagaagctgcaaaagctgaagcagctgcagaagctgctcctgctcccgttaat
ggtggaagcgccgattctggtacttcaccaacttctcatagtggtactgctgctgctccg
ggacctgctgctgggggcgatggtaccggtggtggaggaggtggatcttctggaagtggt
agtggtggtagcactagtactggtgctggtcagggaccaggtcaaagtcctgattcacta
gctccactaccacccccacccccacctccgcaaccacaaccacaacctcctcctgtcgct
ccggcagcagctgctgcggcagctccagcaaaggttccagatggtggtggcgttagtagt
ttgggtggtgtgtcaggagctggtgcaataggacgcccgcacaggacacccaaagcagtt
ggaactccacctcgaccgaaagttgtagaatgggatataaggaatgtgaaggatgttatc
atcccctatattccaataattcctgttgtattaggtgtttctgtatttggtttccttttt
tttaagtattttggattttctggtcggcaaaaacgacgttcccgacgtgcgccacaaatc
ccgaggagtcctccccctttggaagaacatatggaaaaaggcgctctaaccatatcatat
gcaccttctcagtattatatggttagaagacgccatcctctatttagtgcggaaagggag
cgagcaaaaaaacatatcttaaaaggaataagcgaaaaaactgttattcatgttcacttg
gaggcactaaatgaatacaagaaccaagaaccaaactatgggtcgccgccattaatggat
aaagtcgattttcttcaaatcatcgtggaggaatttatgggatccgcataa
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