Plasmodium knowlesi: PKNH_0303500
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Entry
PKNH_0303500 CDS
T01094
Name
(RefSeq) pre-mRNA-processing-splicing factor 8, putative
KO
K12856
pre-mRNA-processing factor 8
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_0303500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_0303500
Spliceosome [BR:
pkn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PKNH_0303500
Complex C
U5 SnRNP specific factors
PKNH_0303500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Motif
Other DBs
NCBI-GeneID:
7318778
NCBI-ProteinID:
XP_002261014
UniProt:
A0A5K1UXM6
A0A384LA79
LinkDB
All DBs
Position
3:186787..196137
Genome browser
AA seq
3070 aa
AA seq
DB search
MSDHGGQEQPAEDRSKEDEQQENATAYHDPSISDTQNYENGQGENADNNPPPQIDSNGMT
RGPIPSTGIPPLQNNMNLFSNLQGSPNNLYYNMAQYNMNPNLIELPEKGKNGPTAPTPVT
SGAGPTGANFVHGKNSFPPNMSNLPPNMLNMPPLMSSLPPNMANLPPNMANLPPNMANLP
PNMANLPPNMANLPPNMTNLPPNMTNLPPNMTNLPPNMTNLPPNMTNLPPNMNYLPPNMN
PLMPNMMNMPPPPFMMKMKNQMNGAESGMNGMPYYFLPSGAHMGNYAQGGMDNMTDPFGN
NMNNLPPPMYLNETGGAEDYYPYNNDEEEYMRGERRHNGEDMHDEYISRSERRKRRRRRR
HYDEESYYAKMKSSQVEEPIEKTVEKEVIPEPTEFNIVKEKARKWKMINSKKYSKKKKFG
VMEEKEEMPCEHLRKIVKEHGDMSNKKYRYDKRVYLGALKYVPHAVFKLLENIPMPWEQI
KNTKVIYHITGAITFVNEIFVVIDPLYIAQWGTMWIMMRREKRDRKHFKRMRFPPFDDEE
PPLDYADNILDIEPLECIQMKLDKDEDKSVIDWFYDSKPLLYNRNHILGTSYKKYKLSLE
QMGVLYRLGNQLFSDFQDDNYFYLFNLKSFYTAKALNMAIPGGPKFEPLYRDIYEDDEDW
NEFNDINKIIIRQQIRTEYKIAFPYLYNNRPRKIAISKYHSPMCVYIKLEDIDLPPFYFD
LIINPIPSYKIRNLDNPEKEKKNMDDFYLIFTRKEVHYQRVPVRGRNNTNSVHDKNRSRE
RSMDECESEYSSDASSRRDGKTVDSGRKSGRRKKNDKDMYPAERATKGKDKRDCRGNKKG
EDHSSHDATLSDDYQDKSDRTAYKNGGGKSRGKGKHQHHSSDENSDTNICSSKCRDEDQV
DNSTIENYSGDSSSRTGYTRGGKKRKNPYNGDDNDDNDDDNDNNDDEKNDDEKNDDEKND
DDDDGADQGKGAGEDKSRSKGVQGTPQSKLKIVVKNVQYGMLPLLHEYPLYTERTINGIQ
LYHAPYPFNKKCGYTRRGIDIPLVQSWFKEHISTKYPVKVRVSYQKLLKCWVLNHLHSKR
PKSMKKKYLFRIFKSTKFFQCTEMDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFN
LKPVKTLTTKERKKSRFGNAFHLCREILRLTKSIVDSHVQYRLGNIDAYQLADGIQYIFS
HVGQLTGMYRYKYRLMRQVRMCKDLKHLIYYRFNTGSVGKGPGCGLWAPLWRVWIFFLRG
VIPLLERWLSNLLARQFEGRVSKGIAKTVTKQRVESHFDLELRAAVMHDIIDMIPAGLKN
NKGKARLILQHLSEAWRCWKANIPWKVVGLPLPVENMIIRYIKLKADWWINATYYNRERI
KRGATVDKTVCKKNLGRLTRLWLKAEQERQHEYLKDGPYVTGEEAVALYTTAIHWFESRK
FTHIPFPPLNYKHDTKLLILALEKLKETFTVKNRLNQSQREELGFIEQAYDNPYETLSRI
KRHLLTQRAFKEISISFLDLYTHLVPVYEVDPLEKITDAYLDQYLWYEGDLRNLFPNWVK
PSDNEPQPLLVYKMCQGINNLHNIWDTQNNECLVMLQTQFSKIYEKIDLTLLNRLLRLIV
DHNIADYITAKNNTNITFKDMNHINSFGIIRGLQFSSFVFQYYTIIIDLLILGLTRAYDI
AGPYNDVNPFLSFQNVRVETRHPIRLYCRYVDKIWILFKFSNEESKDLIQKFLTENPDPN
NENIVGYNNKTCWPRDCRMRKMKHDVNLGRATFWEIQNRIPRSLTSLDWDHHNTFVSVYS
KDNPNLLFTIAGFEVRILPKIRQLSYGINMYTTYINEYGKKDPSKETSSTTNANQAGGGE
KNVVISSSEKEGTWKLQNEVTKEITAEAYLKVSENSMKRFENRVRQILMSSGSTTFTKIA
NKWNTTLIGLMTYFREAVLDTEELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHILIPESDLRYMKQTDSGKITHFRAGLSHEEDQLIPNLYRYISTWESEF
LESQRVWCEYALKRNECHNQNKKITLEDLEDSWDKGIPRINTLFQKDRHTLAYDKGWRIR
QLFKQYQIIKSNPFWWTNQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTFFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKIHESLVMDVCQVFDLNSDLLEIETVQKETIHPRKS
YKMNSSCADILLFANYKWGISKPSLLSDDDNIFLNNLEIKSNSSIALGSYPYTSNQYWID
IQLRWGDFDSHDIERYSRAKFLDYTTDNLSIYPCLTGVLIGVDLAYNLYSAYGNWFNNLK
PLMQKALQKIIQSNPSLYVLRERIRKGLQLYSSEPTEPYLNTQNYNELFSSQTIWFVDDT
NVYRVTIHKTFEGNLTTKPINGAIFILNPKTGQLFLKIIHTSVWIGQKRLSQLAKWKTAE
EVASLIRSLPIEEQPKQIIVTRKGMLDPLEVHLLDFPNIIIKGTELNLPFQALLKLNKIG
DLILKATQPQMLLFNLYDDWLNTISSFTAFSRLILILRSLHINPQQTKILLQPNKNIVTQ
PHHIWPSFNNNQWINLEVQLKDLILNDYAKRNNVHIASLTQNEIRDILLGMEITPPSIQR
QQIAELEKNNLDNIEQQMKVTTSKTTTKHGTEMIVSTLSPHEQQTFTTKTDWKIRYLANN
SLLFRTKNIYVNNSSLKSVSQEGGGNSGVNTISSINDYTYVIAKNLLEKFICISDLKIQI
GGFLYGSSPPDNSYVKEIKCILIPPQIGNYQSVTLSNYLPSSKYLDNLELLGWIHTQTTN
CSNTSNHLTTYDMVAHLSFLQECKSRKKKKSDGAGGTYSDDDIAQEDNANDDSGQFSKIW
DKNKTIILTCSFTPGSCTINAYKLTDDGYAFAKSKQNSADLYAYPNANNLYEQVQILLSN
VFVGFFLIPDDNIWNYNLMGIKFNNNQKYSALLDIPQPFYSDIHRPNHFLQFSLLDQNEG
DEADVETSFI
NT seq
9213 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccatggagggcaagaacagcccgcggaagatcgctcgaaagaggacgagcag
caggaaaacgccacagcctaccatgacccaagcataagtgacacccagaattatgaaaat
ggtcaaggggaaaatgcagataacaatccacccccacagatagatagcaatggcatgacg
agaggccccattcccagtacgggaataccgccactacagaataacatgaacctttttagt
aacctccagggttccccgaacaatctatactacaacatggcgcagtacaacatgaacccg
aatttgatcgagttgccggaaaaggggaagaacggccccactgcacccacacccgtaacc
tcaggagcaggaccaacgggggcgaacttcgtacacggaaagaattcttttcctccaaat
atgtcaaacttgccacccaacatgctgaacatgccgccgcttatgagcagcctcccccca
aacatggctaatctgcctccaaacatggctaatctgcctccaaacatggctaatctgcct
ccaaacatggctaacctgcctccaaacatggctaacctgcctccaaacatgaccaatcta
cctccaaacatgaccaatctacctccaaacatgaccaatctacctccaaacatgaccaac
ctgcctccaaacatgaccaacctgccacccaatatgaactacctaccacccaatatgaat
cccctcatgcccaacatgatgaacatgccacctcctcccttcatgatgaaaatgaaaaac
caaatgaatggcgcagaatcggggatgaatggcatgccgtattacttcctgcccagtggg
gcacacatgggaaactacgcacaaggaggaatggacaacatgacggatccgttcggaaac
aatatgaataacctccccccacccatgtaccttaacgaaaccggaggagcagaagattat
tacccatacaacaacgatgaggaggagtatatgcgaggggagaggcgccacaacggagaa
gacatgcacgatgaatacatatcaagaagtgaacgaaggaaaaggagaagaagaaggagg
cattatgacgaagaaagttattatgcaaaaatgaaatctagccaagtggaagaaccaata
gaaaagacagtcgagaaggaggttattccagagccaactgaatttaatatagtgaaagaa
aaggcacgaaaatggaaaatgataaatagtaaaaaatattcaaaaaaaaaaaaatttgga
gtcatggaagaaaaagaagaaatgccatgtgaacatcttagaaaaatagtcaaagaacat
ggagatatgagtaacaaaaagtacagatatgataagagagtatatttgggtgccttgaaa
tatgtgccacatgccgtttttaagcttttagaaaatatccccatgccttgggaacaaatt
aaaaatacaaaggttatttatcatatcactggagccattacctttgtgaatgaaattttc
gtcgtcatagatccactgtacattgctcagtggggaacaatgtggatcatgatgagaagg
gaaaaaagagataggaaacatttcaaaagaatgagatttcctcccttcgatgatgaagaa
cctccactcgattacgcagataatattctagatatagaaccgttagaatgcatacaaatg
aagttagataaagatgaggacaaaagtgttatcgactggttttacgattcaaaaccttta
ctctacaatcgaaaccacatattgggaactagttataagaagtataaattaagtttggaa
caaatgggggtcctctacagattaggaaatcaactttttagcgattttcaagacgataat
tatttttatttattcaatctaaaatccttctacactgccaaggcgttaaatatggccata
ccaggtggacccaaattcgaacccttatacagagacatctacgaagatgacgaagattgg
aatgagttcaacgatattaataaaattattatacgtcagcaaattagaacggaatacaaa
attgccttcccctatttgtataataatagacccagaaaaattgctatcagtaaatatcac
tctcctatgtgtgtctacattaagttggaggacattgatcttccccctttttatttcgac
cttatcatcaatcctattccatcttataaaataagaaatttggataatccagagaaggag
aaaaaaaatatggatgacttttatctgatttttacaaggaaggaggtacactaccagagg
gtgcctgtcaggggaaggaacaatacaaactctgtccacgataaaaatcgctccagggaa
cgttccatggatgagtgcgaaagcgagtacagtagcgatgcaagtagtaggcgagatgga
aagacagttgattccgggcgcaaaagtggtaggcgtaagaaaaacgacaaggatatgtac
ccggcagaacgagcaaccaagggaaaggataagcgtgactgcagggggaacaaaaaaggt
gaagatcactccagccatgacgcgaccttgtcagatgactaccaggacaagagcgacagg
acagcgtacaagaatggtggcggtaaaagtaggggaaaaggaaagcaccaacaccacagc
agtgacgaaaacagtgatacgaacatctgcagcagcaagtgtagagatgaagaccaggta
gacaatagcacgatagagaactactctggggacagcagctccaggacgggctacaccagg
ggtggaaagaagaggaaaaacccctacaatggggatgacaacgacgacaatgatgatgac
aacgacaacaatgatgatgaaaagaatgatgatgaaaagaatgatgatgaaaagaatgat
gatgacgatgatggtgctgaccagggaaaaggtgccggggaggataagagccggtccaag
ggggtccaaggcacacctcagagtaagctcaaaatagtagtcaaaaatgtgcagtacgga
atgctgccgctgctgcatgagtatcccctctacacggaaagaaccatcaacggaattcaa
ctgtaccatgcgccctacccatttaataaaaagtgtggatacacaaggagaggaatagat
atcccccttgtgcagtcatggttcaaagaacatatatcgaccaagtacccagtcaaggtt
agggtgtcctaccagaaactactcaagtgttgggtgttaaatcatctacactcgaagagg
ccaaaaagtatgaagaaaaagtatctatttagaatatttaaaagtacgaaatttttccag
tgtacagaaatggattgggtggaagtaggtctgcaggtatgcagacaaggatacaacatg
ctaaacctgctaattcataggaagaatttgaattatcttcacctggattacaacttcaat
ttgaaaccagtcaaaacgctaaccaccaaggagaggaagaagtctcgttttggtaacgca
tttcacctgtgcagagaaatactcagattaacgaaatccatagtagattcacatgtacaa
tataggcttgggaatattgatgcatatcaattggcagatggtatacaatatatattttcc
cacgtgggtcaattgacaggaatgtacagatacaaataccgactaatgagacaagtaagg
atgtgtaaagatttgaagcatttaatttattataggtttaatacaggatctgtgggaaag
ggccctggttgtggattgtgggcacctctatggagagtgtggattttcttcctcagaggg
gttataccgttgttggaaagatggctgagcaatttattggctagacaattcgagggaaga
gtctccaaaggaattgctaaaacggttactaagcagagggttgaaagtcacttcgattta
gaacttagagcagctgtcatgcatgatattatagacatgattcctgctgggctaaaaaat
aataaaggaaaggctagactcattttgcaacatcttagtgaagcatggagatgttggaaa
gctaacattccctggaaggtcgttggcttaccacttccagtggaaaatatgatcattcga
tatattaagctgaaagccgattggtggattaacgctacttactataatagggagagaatt
aagagaggagctactgtagacaaaaccgtgtgtaagaaaaatttaggtagattgacaaga
ctctggctgaaggctgaacaggaaaggcaacatgaatatttgaaagatggtccctatgtc
actggagaagaagctgtcgccctttacacaacagcaattcactggtttgaatcgcgtaaa
tttacacacattcctttccctccactgaattataagcatgacaccaagttactcattcta
gctttggagaaattgaaggaaacttttaccgttaaaaataggcttaatcaatcacagagg
gaagaactggggttcatagaacaggcgtacgacaatccctatgaaacgctatccagaata
aaaaggcacttactcacccagagagcattcaaggaaatatccatctcgtttttagatctc
tacacgcatttagtccctgtgtacgaagtagacccgctagaaaaaattacagatgcttac
ctggatcagtacctgtggtatgaaggagacctaagaaatttatttcccaattgggttaag
ccctccgacaacgaaccgcagccattactagtgtataaaatgtgccaggggataaacaac
ctacacaatatttgggatacacaaaataatgaatgcctggtaatgttgcaaacacaattt
agtaaaatatatgagaaaatcgacttgacgctactgaacagattgctacgtttgattgtg
gatcacaacattgcggattacataacggcgaagaataatacaaacattacctttaaagat
atgaaccatataaactcgtttggcattattcgaggattgcaattttcctcgttcgtattt
caatactacaccattattatcgatttactcattctgggcttgacgagagcgtatgatatt
gctggtccttacaacgacgtgaacccatttctgagtttccagaatgtgcgcgtggagacc
agacatcctatcagactgtactgtagatatgtagacaaaatttggattctcttcaaattc
tccaatgaagaatcaaaagatttaattcagaaatttttaacagaaaatcccgacccaaat
aatgaaaacatcgttggctataataacaagacctgttggccaagagattgtcgaatgagg
aaaatgaagcatgatgtcaatctgggtagagcaacattctgggaaattcaaaatagaatc
cccagatctttgacatcgctggattgggatcaccacaacacctttgtcagtgtctattcg
aaggacaacccaaatttacttttcaccattgccggatttgaagtgcgtatccttcccaaa
ataaggcaactgtcatatggcattaacatgtacaccacgtacataaacgagtatggaaag
aaggatcccagcaaggaaacttcctccacaacaaatgccaatcaagccggtggaggagag
aaaaacgtggtcatatcatccagtgaaaaggaaggcacatggaagctacaaaacgaagtt
accaaagaaatcaccgcagaggcctatctaaaggtgtcggaaaatagtatgaaacgattt
gaaaatcgagttaggcaaattttaatgtcatctggaagtaccaccttcaccaaaattgca
aacaaatggaacaccacccttatcggattgatgacatattttagggaggccgttttagat
acagaagaattgttagacctcctagtaaaatgtgaaaataaaatacaaactcgtataaag
ataggtttaaattcgaagatgccttctcgttttccacccgttgtgttctacacacctaag
gagttgggtggtcttggaatgctctccatgggacacatattaattccagagtccgaccta
cgttatatgaagcaaacagatagcgggaaaattacccattttagagctggactttcccac
gaagaagatcagctgatacccaacctgtacagatacatctccacctgggagagtgaattt
ttagaaagtcaacgtgtgtggtgtgaatacgcactgaaaaggaatgaatgccacaatcaa
aataagaaaataactttggaagatttggaagactcttgggataaaggtatccccagaatt
aacaccctctttcagaaagacagacacacattggcatacgacaaggggtggagaataagg
caactgttcaagcagtatcaaataattaagagtaaccctttttggtggactaatcagaga
cacgatggaaaactctggaatctaaacaattatcgaacggatatgattcaagccctagga
ggggttgaagggatactagagcatacgttatttaaaggaacttttttcccgacatgggaa
ggattattctgggaaaaggccagtgggtttgaagaatctatgaaatataaaaagttaacg
aatgcacaaagaagtggattgaatcaaatccccaacagacgatttaccttatggtggtct
ccaacaatcaatcgagcaaatgtgtacgttgggttccaagtgcagttagacttaacaggt
atattcatgcatggaaaaatacccacactgaaaatatcgctgatccaaatatttagagca
catctatggcagaagattcacgaatcgctagttatggatgtatgtcaagtgtttgatttg
aattctgatcttctagaaatcgaaacggtgcaaaaggaaaccatccacccgagaaaatct
tataaaatgaatagctcctgtgcagacattcttctctttgccaattacaaatggggaatt
tccaagccatccttactttcagatgatgataatatttttctgaacaatttggaaattaag
tcgaacagctcgatagccctggggtcttatccctacacgtccaaccagtactggattgac
attcagctccgatggggagattttgattcccatgacattgaaaggtacagcagagccaag
tttctagattacactacagacaatttatccatatacccttgcctcactggggtcctcata
ggagtagatttggcatacaacctatactccgcatatggcaactggtttaacaacctcaaa
ccgttgatgcagaaggcgttgcagaaaattattcaatcgaacccgtcactctacgtgcta
agggaaagaatcagaaagggacttcaattatactcctctgaacccacagaaccatattta
aatacgcaaaactacaatgaactcttctcctcgcagaccatctggtttgtagatgacacc
aatgtttaccgagttaccatccataagaccttcgaagggaacctaaccaccaagccgatt
aatggcgccatcttcattttgaatcccaaaacaggacaactctttttaaaaattatccac
acatctgtatggattgggcaaaaacgtttatctcagctagccaaatggaagacagcagaa
gaagtggcctccctaattaggtctctccctatagaagaacaaccaaaacaaattatcgta
actaggaaaggaatgctagatccattggaagtgcacttgttagatttcccaaatattata
atcaaaggaacggagttgaatctcccattccaagccttactaaaactgaacaaaatagga
gatcttatcttaaaagcaacccagccacaaatgcttctattcaatttgtatgatgactgg
ctaaacacaatttcatccttcaccgcatttagtagactaatcctcatactgagaagttta
cacataaacccgcagcaaacgaaaatcctcctgcaaccgaataagaatatagtaacgcaa
ccacatcatatctggccttccttcaacaataaccagtggattaatttagaagttcaattg
aaggatctaattcttaacgactatgcgaagagaaacaatgtacatatcgcctcgctcact
cagaacgaaataagggacatcctcctaggtatggaaataacacccccatctatacagagg
caacaaattgcggaactggaaaaaaacaatttagataatatagaacaacaaatgaaggtt
accacgtcaaaaacgacaacgaagcatggaactgaaatgattgtctcaactttatccccc
cacgaacagcaaacattcacaacaaagacggattggaaaatacgataccttgctaataac
tccctactcttcagaacaaaaaatatttatgtaaataatagttccttaaaaagtgtatct
caagaaggaggaggcaacagcggtgtaaataccattagctctattaacgattacacgtac
gtcattgccaaaaatctacttgaaaaattcatttgcatttccgatctgaaaatacaaatt
ggaggatttctgtacggttcctccccacctgacaactcctatgtgaaggagattaaatgc
attcttatccccccccagattgggaactaccaatctgttaccctgtcaaattatttaccc
tcaagtaaatatttggacaatttagaactcctcggttggattcacacacagaccaccaac
tgctccaacacatctaaccatttaacgacatacgacatggttgcacatttgtcatttcta
caagagtgtaaatccaggaagaagaaaaaatcagatggagcgggaggaacatactctgat
gacgatatcgcacaagaggataatgcaaatgacgacagtggacagttctccaaaatatgg
gacaagaacaaaaccataattcttacttgttcatttactcctggtagctgtaccataaat
gcttacaaattaactgatgatgggtatgcatttgccaagagcaaacagaattcagctgat
ctgtatgcctacccgaatgccaacaatctgtatgaacaagttcagatactcttatccaat
gtcttcgttggtttcttcctaatccccgatgataacatatggaactacaatctcatgggt
atcaaatttaacaataatcaaaaatattctgctctgttggatatcccgcaacccttttac
tcagacatacacaggcccaaccactttctccagttttccctgcttgatcagaatgaaggg
gatgaggcagatgtcgagacctcgttcatttga
DBGET
integrated database retrieval system
