KEGG   Plasmodium knowlesi: PKNH_0307200
Entry
PKNH_0307200      CDS       T01094                                 
Name
(RefSeq) protein SOF1, putative
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
pkn  Plasmodium knowlesi
Brite
KEGG Orthology (KO) [BR:pkn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pkn03009]
    PKNH_0307200
   04121 Ubiquitin system [BR:pkn04121]
    PKNH_0307200
Ribosome biogenesis [BR:pkn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    PKNH_0307200
Ubiquitin system [BR:pkn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     PKNH_0307200
SSDB
Motif
Pfam: WD40 Sof1 WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP KNTC1_N Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 7318909
NCBI-ProteinID: XP_002261051
UniProt: A0A5K1UYD5 A0A384K913
LinkDB
Position
3:338824..340269
AA seq 481 aa
MEVKILHRNPEEYKNNPGASTYKHSRNVDPNIHLFQREIEYKRALNATKMDKIFAKPLVK
CLDGHDDSVRSLCVSNKSLTDLYSGSCNGFINIWNVLNKTLIKKVKAHEGFVRALCISHD
EKFLFSCGDDKYIKQWVIDKSGGVSDIGGREDANSLSPSELVRGEGSLVASQNMMNLSHL
SDEVTPKKIYVCKSVPNSIDKHFSEPLIISGSQHLDVWDYYRNNAIASFDYNSEYIYYVK
FNYAQRNLVGLTLSDNSVGLADIRTKTPIKKMFLKYRCNSLSWNNMNPKQFVVANEDSNL
YTFDMRHLKTATLVHKGFVNAVLDVDYSPIGDKFVACSYDKTVRLFNSDETTSYDVYHTK
RMQHVLCCKFSLDTKYVYTGSSDMCIRIWKSCSHEPTGILSNKEKQAINYRNKLKEKYSS
LKEIRRIRNHHHVPALIKSMSDKKKVMLEAKRRRENNRVKHSKDTDQLPIPEKKKIFVTE
Q
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggaagtgaagatcctgcataggaacccggaggaatacaaaaacaacccgggggcctcc
acctacaagcatagcagaaatgtcgaccctaacattcaccttttccaaagggaaatagaa
tataagagggccctaaatgcaacgaaaatggataaaatttttgcaaagcctttagtgaag
tgtttggatggtcacgatgattcagtccgatcactctgcgtttcaaataaatccctaact
gatctgtacagcgggagttgtaacggcttcattaacatttggaatgtgcttaataaaacg
ttaattaaaaaagtgaaagctcacgaaggattcgtgagggcactgtgcatcagtcacgat
gagaaattcctcttcagttgtggcgatgacaaatatattaagcagtgggttattgataag
agcggaggggtgagcgatataggcggccgggaggatgccaatagcttatccccctctgag
ctcgtacgaggggagggatcgcttgtagctagccaaaatatgatgaacctgagccaccta
tccgatgaagtgacaccgaagaaaatctacgtctgcaaaagcgtgcccaacagtatcgat
aaacatttctcagaaccgctaataatatcaggaagtcaacacttagatgtctgggactac
tacagaaacaatgccatagctagtttcgattacaacagtgagtacatatattacgtgaag
ttcaattacgcacagagaaacctagttgggttaactctttctgataattctgtagggcta
gctgacataagaaccaagacacccatcaaaaaaatgttcttaaaatacagatgcaattct
ctaagttggaataatatgaatccaaaacagtttgtcgtggcgaatgaagactccaacctc
tacacctttgacatgagacacttaaaaacggctactcttgtgcacaaaggttttgtaaat
gccgtgttggatgtagattactctcccattggagacaaatttgttgcttgttcgtatgac
aaaacagttagattatttaatagcgatgaaacaacgagttatgatgtgtaccacacgaag
agaatgcagcatgtcctctgttgtaagtttagcttagacaccaagtacgtctacaccggt
agctcagacatgtgtattcgtatttggaaatcttgttctcatgagccaactggcattctg
tccaacaaggaaaagcaagccataaattatcgaaacaaactgaaggagaaatattcttcg
ctcaaggaaattaggcgcatcagaaatcaccaccatgtacctgcgctcatcaagagtatg
tctgacaaaaagaaggtaatgttggaggccaagaggaggcgcgagaataacagagtcaaa
cactcgaaagacacagatcagcttcccattccggagaagaaaaaaatattcgtcacggag
cagtag

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