Plasmodium knowlesi: PKNH_0307700
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Entry
PKNH_0307700 CDS
T01094
Name
(RefSeq) replication protein A1, large subunit, putative
KO
K07466
replication factor A1
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03030
DNA replication
pkn03420
Nucleotide excision repair
pkn03430
Mismatch repair
pkn03440
Homologous recombination
pkn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKNH_0307700
03420 Nucleotide excision repair
PKNH_0307700
03430 Mismatch repair
PKNH_0307700
03440 Homologous recombination
PKNH_0307700
03460 Fanconi anemia pathway
PKNH_0307700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkn03000
]
PKNH_0307700
03032 DNA replication proteins [BR:
pkn03032
]
PKNH_0307700
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_0307700
Transcription factors [BR:
pkn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PKNH_0307700
DNA replication proteins [BR:
pkn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PKNH_0307700
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PKNH_0307700
MMR (mismatch excision repair)
PKNH_0307700
DSBR (double strand breaks repair)
HR (homologous recombination)
PKNH_0307700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
POT1PC
CDC24_OB3
OB_MEIOB_N
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
7318904
NCBI-ProteinID:
XP_002261056
UniProt:
A0A5K1UIF9
A0A384K8D7
LinkDB
All DBs
Position
3:complement(367536..371111)
Genome browser
AA seq
1191 aa
AA seq
DB search
MNRNEEILSKATPDFIYRFFTETNSEEILSLLNKQVTLLCFSQMNAGANQVFLKVIDGTI
PPQYYAIVHVGMDDASMTATPISYVKKLIIIENFSITNYYGKLFILTKKIRVLMSVDYFD
IEDLFRRYQLQSISYLLMNTKGENLSKDGGSRPTSEYSVEGQPRTSSMISRYSGEYGNES
KARECNYYPRGGSAGPGASAPAPAATGEYSNNSIPRESYSKLNDRQEGDNRPDNYDRCQR
VSGENLMREPMTKNGNAAYGERQPYGDKPPYVERSPYREATAGRDTPQIYHHGRMAEDNG
RGKQFPERLSDPPSTDKFSHSEISISRDYLPYRGNELERNPSDVTSPSHQNYPTPQRGSQ
PYNKRNNTTVYDQSSANSANGPNGAGGPNGAGGPNGANGPNGASGPNGPYGNNHYSNGKS
RTHNIAGEVNNGRSGSSYDPGVGTPMGSSVYREEPPLGECTSRSEPKARASNPNGYMCEG
GMDEGPVGPGGATLGEYKGRYALTGNNPDKGPPEDRSYYQNGRGTSNMSKNSSGANQYYY
PPRDGEEGNNPRSVDDEAYYGRSGAPHINGNGRGKSSEMGTKMAGEGRNGPNYNGDVAKI
SRSDEAIHGRYVPTEGAAVGGSYNHRGVSTYGSSGTGSGNRGAPESNRKERNESMGSLQD
TKETLNDMEEYSSDRRNDSKSMLKENSSSRNSRKCAPYQQGNNPVIKINDGILMHINKLS
QYSSKWIIKARVQFKDVVRKYYSGNKEGKVFNIELCDEDGEIKVNFFGKAVDKWYDYLQL
GKIYKISKGYIKAANKKFTTIKHDYEITLDENSIIEALEENDNIPKFIYNFTSIENIKNL
KVGSLVDVIGVVFSYQESTQILIKKTGQYKEKRDIILIDDSKETINVTLWGDHALNIEEG
YLKDNSIICFKNLKVGEWQGIKLESHPKTKIDINPEIDRAQMLQTWWRNNKQNLYSSVNI
GSGIFHMELQKTIEEIKKDVNLANEDALSGKGIIFTTFGFIDHIYNSMPVYSACPDCNKK
MISNVVEEEEDDMNSPQMMDQSMYCSKCNKNNTPTYSYFINLKITDSTDSLRATAFAGCA
RTIMNGLSANEFMALRQEYVTQENIENFDLIEKAKLNEFFFRIKAYMTSHMDELKKKYTI
VDIVPLNKLLVDNCKYLIRSIRSLTEKQWRSDGLPDVEDKVQPVQEAPAPR
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaacgaagaaattctgtccaaggcaacgccggactttatatacagatttttt
acagaaaccaattcagaggaaatcttaagcttgttaaacaaacaggtaacgttattatgt
ttcagtcaaatgaatgctggggccaatcaagttttcctaaaagtaatagatggaaccatt
ccccctcagtactatgccattgtacacgtggggatggatgatgcaagcatgacggctaca
cccatctcctatgtaaaaaaattaattattatagaaaatttctcaatcacaaattactat
gggaagcttttcatattaacaaaaaaaattagagtgcttatgagcgtagactactttgac
attgaagacctgtttaggaggtaccagttacaaagtatttcttacctcctaatgaacaca
aaaggtgagaacctctctaaggatgggggctctagacctactagtgaatacagcgtagaa
gggcaacccagaaccagtagcatgatttctcgctattcaggtgaatacgggaatgagagc
aaagcgagggagtgtaattactacccccgtggaggaagcgcaggacccggagcatctgca
cccgctcccgctgcaacaggagaatatagtaataattccattccacgagaaagctattct
aaattgaatgatcgtcaggaaggggacaacagacctgacaactacgacaggtgtcaacga
gtgtcgggagaaaatttgatgagggagccaatgaccaagaatggcaatgcggcatatggg
gagagacaaccctacggggataaacccccttacgtggagaggtcgccttatagagaagcg
acggctggaagggacacgccccaaatttaccaccacggcagaatggcagaagataatgga
agggggaagcaattccccgaaaggttgagtgacccccccagcacggacaagttttctcat
agcgagatttccatcagtcgcgactatctcccgtaccgtggaaacgaattggaaaggaat
ccttcagatgtcacatccccctcgcatcagaattaccccactccgcaaagagggagccag
ccctacaacaagagaaacaacaccaccgtgtatgaccaaagcagtgcaaacagtgcaaat
gggccaaatggtgcaggtggaccaaatggagcaggtggaccaaatggtgcaaatgggcca
aatggtgcaagtggaccaaatggtccgtatggaaataaccactacagtaacggcaagagc
aggacgcataacattgcaggggaggtgaacaacggcagaagcggaagcagttacgacccc
ggagtcggcacccccatgggctcaagtgtgtacagagaagaaccccccttgggggaatgc
actagtagaagtgaacccaaggcgcgcgcgagcaatccaaacggctatatgtgcgagggg
ggaatggacgagggaccagttggaccaggaggagcaaccctcggggagtataaagggcgg
tatgccctgactgggaataatccagacaaaggcccccccgaagataggagctattaccaa
aatggcagggggaccagtaatatgagcaagaattcaagcggggcgaatcagtactactac
cctccacgtgatggagaagagggtaataacccgagaagtgtagacgacgaggcgtattac
ggaaggtcgggggcgccacatataaatggcaatggacgtggaaagtctagtgagatgggc
acgaaaatggcgggtgagggaagaaatggtccgaattacaatggagatgtggcaaaaatt
agtagaagcgatgaggcgatacatgggaggtatgttcctactgagggagcagccgttgga
ggaagttacaatcacaggggggtgagcacttatggttcatctggcacaggaagtggaaat
aggggagcaccagaatcaaatagaaaggagaggaatgaaagtatggggagtttgcaggat
acgaaagaaacactaaatgacatggaggagtattcatcggatagaaggaatgatagtaag
agtatgttgaaggaaaatagttccagtaggaatagcaggaaatgtgcaccctaccaacaa
ggaaacaatccagtaatcaaaattaacgacggaattttaatgcatataaataagctatct
caatattcatccaagtggataataaaggcaagagttcagttcaaagatgtcgtgagaaaa
tactactcaggaaataaagaaggaaaggtatttaacatcgaattgtgtgatgaagatgga
gagataaaagtaaacttctttggaaaggcagtagacaaatggtatgactacctacagttg
ggtaaaatatataaaataagtaaaggatatatcaaagcagcgaacaaaaaattcacaaca
ataaaacatgactacgaaattactctagatgaaaattcaattatagaagcattagaagaa
aatgataatattcccaaatttatttataactttacatctatagagaatataaagaatttg
aaagtgggttcgctagtagatgtaataggagtggtatttagctaccaagaaagcacccaa
atattaatcaagaaaacaggacaatataaagagaagagggatattattcttatagatgat
agcaaggaaactatcaatgtaactctgtggggagatcacgcgttgaacattgaagaagga
tacctaaaggataatagtataatatgttttaagaatttaaaggttggagaatggcaggga
ataaagttggagtcgcatcccaaaaccaagattgatataaacccagaaattgatagagcc
cagatgctacagacttggtggagaaataacaaacagaacctttacagctccgtcaatata
gggtcaggtatattccacatggagttacaaaaaactattgaagaaattaaaaaggatgtc
aatttagctaatgaagatgctttatcaggcaaaggaattattttcacaaccttcggtttt
atcgaccatatttataactccatgcctgtgtattcggcttgtccagattgcaataagaag
atgatttcaaatgtcgtggaggaggaagaggacgatatgaattcgcctcaaatgatggac
caatctatgtactgttctaagtgcaataaaaataacacccccacatatagctacttcata
aaccttaagattacagacagcacagactccttgagggccacagcctttgctgggtgtgct
cgtactatcatgaatggcctgtctgctaacgagtttatggccctcagacaagagtacgta
acgcaagaaaatatcgagaacttcgacttgatagagaaagctaaattgaatgaattcttt
ttccgcatcaaggcctatatgacgtcacacatggatgagctgaagaaaaagtacactatc
gttgatatcgtaccgctgaataagctgctcgtggacaattgcaagtatttgattcgatcc
atccgcagcttgacggagaagcagtggagaagtgatggcttacccgacgtggaagacaaa
gtacaacccgttcaggaagcccctgcccccagatag
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