Plasmodium knowlesi: PKNH_0401300
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Entry
PKNH_0401300 CDS
T01094
Name
(RefSeq) replication factor C subunit 1, putative
KO
K10754
replication factor C subunit 1
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03030
DNA replication
pkn03410
Base excision repair
pkn03420
Nucleotide excision repair
pkn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKNH_0401300
03410 Base excision repair
PKNH_0401300
03420 Nucleotide excision repair
PKNH_0401300
03430 Mismatch repair
PKNH_0401300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkn03032
]
PKNH_0401300
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_0401300
DNA replication proteins [BR:
pkn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PKNH_0401300
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PKNH_0401300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_assoc_2
Rad17
AAA_30
DNAX_ATPase_lid
RCF1-5-like_lid
BRCT_2
PTCB-BRCT
AAA_14
nSTAND3
AAA_22
RuvB_N
AAA_19
AAA_16
Sigma54_activ_2
SRP54
Motif
Other DBs
NCBI-GeneID:
7319129
NCBI-ProteinID:
XP_038969461
UniProt:
A0A679L1P8
LinkDB
All DBs
Position
4:74344..77127
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AA seq
927 aa
AA seq
DB search
MSSKGKKLFDDDSTSHGGRKRKRLKKVSSSLFDDDDDNDNDLFNTEDTSASKSKGVVEIK
DDEDAEQGDIYCTTGTTSPKSVQNKSSKKHAYHDITSYFKSNSKRMEHQAEEDKEETGHN
VKDNTGEKNTSLFNLESEKLKNEPSHTTTGVKRQREQDLSNMINELKYKKKHTSPGKGKA
KEESDLNNSGGNITKKKNDTTSTSTINANKNNNFDYLPFHSLKFVLTGVFKNFSRDELQS
KIKEHGGNVMSAVSSKTHYLIHGEYLEDGRMYNEGKKYQKALEVQKMSKCNIKILNEEEF
LQMLPEEKNKTSKWEDAADGKDDQDALEKMQQSDFTKVGSESGASGSGSYNRGTHSEKET
PPKCSAPGDQQKILNQLWVEKYRPRSLNELVGNTQNVLKLKNWLASWDDVCIKGLKKQVT
KTFRGVYENVNARCALLSGSAGIGKTTTAKIVAESSGYNVIEFNASDERNKAAVEKISEM
ATGGYSIASIKSRKLTKTCIIMDEVDGMSSGDKGGSAAILKLIEKTKCPIICICNDRQNS
KMRTLANKCYDLKFTSPNKNSVVNRLLEICKKEDITMEPNALELLWESTNGDMRQMLNAL
QLLSRTYKRIQFLDLKKELNNSNKNIQSLANPFEITLKLLNFHESSKLKIREIMDLFFVD
YELIPFFISENYTNVFNDNDKSTNWINKWIAYSQISYDLALSEKIKYNMKTTMDFSLLPH
YSILSCVCPVMRIKMLKAYMSGRINFPSAFGKISTFNKNKRLLNEVCFNMSYKLNVCPKH
MVTSGFLNYIYAQIISPLQKSNIPKAIQLMEEYNVTKEMITENIPCLRLPTQENLYDKLD
SKIKAAFTRQYNAFHVIKNDPNMMRKGLKSTEKKSSFKMNEYESDEDMDDLSESKEDKDD
DILVKSKVDKKPASKGKATPRSKTTKR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaaaggaaagaaactcttcgatgatgatagtaccagccatgggggaaggaaa
aggaagcgactgaaaaaagtatcaagcagtttgtttgatgatgatgatgataatgacaac
gatttgtttaacacagaagataccagcgcatctaaatccaaaggggttgtcgaaattaag
gacgacgaagatgcagaacagggggatatctactgcaccacaggaactacctcccccaaa
tcagtgcagaataagtcatcaaaaaaacatgcgtaccatgatatcacgtcctacttcaaa
tcaaattccaaaaggatggagcatcaagcagaggaagacaaagaggaaaccggacataat
gtgaaggataatacaggagaaaaaaatacaagtctcttcaacttagaaagtgaaaaatta
aaaaacgaaccttctcatacgaccaccggggtgaagaggcaaagggaacaagacctatcc
aacatgataaacgaacttaagtataaaaaaaaacacacctctccagggaagggaaaagcc
aaagaagaatccgaccttaacaatagcggagggaatatcacaaaaaagaaaaatgacacc
acctccacgtccaccatcaatgcaaataaaaacaacaacttcgactacctccctttccat
agcctcaaatttgtcttaacaggagtttttaaaaatttctctagagacgaattacaatcc
aaaattaaagagcatgggggaaatgttatgtcagctgtatcgtcaaaaacgcattatctc
attcatggggagtacctggaagatggtcgaatgtacaacgagggaaagaagtaccagaag
gccttggaagtgcagaagatgagtaagtgcaatattaaaattttgaatgaggaggagttc
ttacagatgctaccagaggagaagaacaaaacatccaagtgggaagatgccgcggacggg
aaggatgatcaagacgcattagaaaagatgcaacagagcgacttcaccaaggttggaagt
gaaagtggcgccagcggaagtggtagctataaccgtggaacacacagcgagaaggaaacc
ccacccaaatgcagtgcacctggagaccaacagaaaattctcaatcaactatgggtggag
aagtacagaccaagaagcttaaatgaacttgtcggaaacactcaaaatgtactgaagtta
aaaaattggctagctagctgggatgatgtatgtataaagggattgaaaaaacaagtaacg
aaaacatttagaggggtgtacgaaaatgtaaatgccaggtgtgcccttttgagtggctcc
gcagggatcggaaaaacgacgactgcaaaaattgtggccgaaagttcaggatataacgtt
atcgaatttaatgcatccgatgagagaaacaaagcagcagtagaaaaaatcagcgaaatg
gccactggagggtactccattgcttctatcaaaagccgaaaattaacaaaaacttgtata
attatggatgaagtagatggcatgtccagcggagataaaggaggtagtgcagccatatta
aaattgatagaaaaaacaaagtgtccaattatctgcatttgcaatgacaggcaaaatagc
aaaatgagaacattagccaacaaatgctacgatttaaaattcacaagtcctaacaaaaat
agtgtcgtcaataggctactggaaatatgcaaaaaagaggatatcacgatggagcccaac
gcattggaacttctatgggaaagcacaaatggagatatgagacaaatgctaaatgcactc
caattactctctagaacgtataagcgaatccaattcttggacttgaaaaaagagttaaac
aactctaataaaaacatacaatctttagctaacccatttgaaataacactcaaactttta
aactttcatgaatcatcaaaattaaaaatacgagaaattatggacctcttttttgtagac
tatgaattgatcccattttttataagtgaaaattacaccaatgtatttaatgataatgac
aaatctactaactggataaataaatggattgcctactcacaaatatcatacgatttagcc
ctatcagaaaaaattaaatacaatatgaaaactacaatggatttttccctccttccgcac
tattccatcctgtcatgtgtatgtcctgtcatgcgaattaaaatgttaaaggcatatatg
tctggcagaattaattttccctccgcctttggaaaaatttccacctttaacaagaataaa
aggctactaaacgaggtatgctttaacatgtcgtacaaattgaatgtctgtccaaagcac
atggttacctctgggttcttaaattatatatatgcacagattatttctccactccaaaaa
agtaacatacccaaggccatccaacttatggaagaatataacgttaccaaagaaatgatc
acggaaaatatcccctgcttgagattacccacgcaggaaaatttgtatgataaattggat
tcaaaaattaaggcggccttcactaggcagtacaacgcttttcatgttatcaagaatgat
cctaatatgatgcgcaaggggctcaagtcaactgagaagaaaagttccttcaaaatgaat
gaatacgaatccgatgaagacatggacgacctcagtgaatccaaagaggacaaggacgac
gacatactcgtcaagagtaaggtcgacaagaagcctgccagcaaggggaaggctacccct
cgctccaagacaacgaaacgatga
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