Plasmodium knowlesi: PKNH_0507100
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Entry
PKNH_0507100 CDS
T01094
Name
(RefSeq) nuclear cap-binding protein subunit 2, putative
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03013
Nucleocytoplasmic transport
pkn03015
mRNA surveillance pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_0507100
09122 Translation
03013 Nucleocytoplasmic transport
PKNH_0507100
03015 mRNA surveillance pathway
PKNH_0507100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_0507100
03041 Spliceosome [BR:
pkn03041
]
PKNH_0507100
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PKNH_0507100
Spliceosome [BR:
pkn03041
]
Common components
Common spliceosomal components
Cap binding complex
PKNH_0507100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Cas_St_Csn2
Motif
Other DBs
NCBI-GeneID:
7319429
NCBI-ProteinID:
XP_002258205
UniProt:
A0A5K1UQQ3
A0A384L7C8
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All DBs
Position
5:276570..277546
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AA seq
236 aa
AA seq
DB search
MSHLYEEVYKKRKYYDRALCNDYEDWLSKIQFSKTVYIGNLSIYTTEQQIYEHMRQAGNV
ENIIMGLHRTEKSPCGFCFVVYRSKEGYTQAVNFLNNSILDGRIIRVDEDLGIIGRRKYG
RGKSGVQKRDERIKYYDEDRPQVLDHLVDNNFISKKRKLNNVDVIAPPYYERNVKQRTTL
YNSFEQSGDFRGNRFVQLKPTVTLYPNVQHMMEYNRNKHSNGLYNFHSKRGGKRRM
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatttgtacgaagaggtatacaagaagaggaagtattacgatagggccctttgc
aacgactatgaagactggctgagcaaaattcaattttcgaaaaccgtgtacattgggaat
ttgtccatttatacaacggagcagcagatttatgagcatatgcgccaggcgggaaacgtg
gaaaacataatcatggggctgcaccgcacggagaagtcgccatgcggattctgcttcgtc
gtctacagaagcaaagaggggtacacgcaggcagtgaactttctaaacaactccatccta
gacggaagaataataagggtggatgaggatctgggaattattggaaggagaaaatatgga
cgtgggaaatcaggagttcagaaacgagatgagagaattaaatactacgacgaggatcga
ccccaagtcctagaccatttagtggataacaattttatttcgaaaaagaggaagcttaac
aatgtagatgttattgctcctccttattatgagaggaatgtgaagcagaggaccaccttg
tacaacagttttgagcaatcgggagattttaggggaaacaggttcgtccagttgaaaccc
actgttactctataccccaatgtgcagcacatgatggaatacaacagaaataaacatagt
aatggcttgtataactttcattcgaaaaggggcgggaagaggcgaatgtga
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