Plasmodium knowlesi: PKNH_0514400
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Entry
PKNH_0514400 CDS
T01094
Name
(RefSeq) pre-mRNA-splicing helicase BRR2, putative
Organism
pkn
Plasmodium knowlesi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
Motif
Other DBs
NCBI-GeneID:
7319403
NCBI-ProteinID:
XP_002258275
UniProt:
A0A5K1UB39
A0A384KQL7
LinkDB
All DBs
Position
5:<658826..>666643
Genome browser
AA seq
2605 aa
AA seq
DB search
MAEEYEKYKRFEYRMNSNLVLQREGPIPNFNEPTGESESLVGKLKHKMGDKVEYTKPTSQ
GRRTDEGYRRSNKRKEFIFDESRKKVKRGSSTSVKDRSVLNINLQDIFMYKPSTKYTEKI
FSNVMGMVRGIIGDHTGDIINSACNEVLHILKNDKLSNEEKKKQVEDALEVSSMTDEQFI
ELNNYAREIYDFNREEVFEEVDEEEGVAVVFEEDDEYLDYRSSTKGRDGSRSQEDMATTN
ELTDDEDDDDDDNDEEDDGSDDDNDDDDADRHDSDNDGDDDQDDQSVEENNLGEEDDGND
DEEGEGETRKKNTKLEKKSSGGKSSKGGMIMRTGSIPMKKKTEKQEKHLSLKGIKKDRDG
KRKEGEDYDLETNSIDAHWLQRELNKVFSDPSLCLEKEKEVLDVLGIYDIQECENKLVHI
LKYENFCMAKLLIKNRWKVYYCTLLGQAQTEKEKKGIMEEMRKSEEGEEILEELSNFKAM
KRNKQSEFAKTMRREADNLFRKRRYGGEEATEESLRGDRFIREEDDDDDQDDDEEEDEDN
GDDSNDEEDDAPAKNAKSGTKQSVQTKKLSVRMGKKKERKDSAGERHDAEDDEDEEEVEQ
FRAKFVDLEKMEVKQKGTNFFNREVVLPVDSSRVERKEYDEIIISSSRSKNSSLKGSMDN
EKSRGKENYFTNPDDIKLVSVSELPEWAQEVFTCVGISKLNAIQSKVHEVALHMYEKNML
ICAPTGSGKTNIALLCMLNVIGTYRLRSGNIDKNNFKIIYISPMKALVNEQVQSFSLRLK
CLNMKVSELTGDVNLSSKEIEESQVIVMTPEKFEVISRKWNEKILLQKIKLIIFDEIHLL
NEIRGNVLESIISRINRYVDNTLVYDGGVAHGVQNEVNGDQQNDLNMRRKKIRLVGLSAT
LPNYEDVGMFLRADLRSGVFYFDYSFRPVQLEQHYIGIKEKKGIKKYALMNQVTYEKVLE
EAGKNQILIFVHSRKETYRTAKMLIEKFLKSDNLNKFLMGKKVSSEILLSEKEAIVNEEL
KEILPFGFGIHHAGMKRTDRKLVEDLFSDRHLQVLVSTSTLAWGVNLPAHTVIIKGTSVY
NISVGDFDELSPMDILQMVGRSGRPQYDKSGKAIIITEHKNLQLYLSLNNEQLSIESTLM
KNIVNVINSEIVLKNIQNIKEGVNWFRYTYLYIRMMKNPELYGIFGKNEKMESIYFEQGK
ENNISDLFMEKLNKKIYNIIYSAFITLEKYDLVKYNKKLNTVSSTYIGRISSYYYVDYRS
IDLYSKKLNKHTNETELLKIFGMSDEFKHIFVREEEKLELSVIMEKLPIPLKESISIPHT
KINILLQLYLSNVTLNGYVINADLIYIQQNALRIFRAFFEISLKKNSYHLSALTLKFCKM
VERKMWGTMSPLRQFGLLSNELIRIIEKKNITFRNYLNMSLNEYITIFKNKKIAKNVYKL
VHHFPKIELNAYIQPINHRMLKVELNVTPDFIYNPKYHGNFMLFWVFVFDISSESMLHYD
LFSLKRGGVANSANINAFNETSQLYKEGEQSGDTLDDHLLTFFVPINENPFYIVKVVSDK
WLECESTINLYLKDIILPSKVSFSTPLLDLQALPVNTLKFEEAKKFFHSRNITHFNPIHT
QIFPSVYEMGGNVIICSSPGRYYLTPAEFAILKMIRSVMELNSFIRRYIKKEDDLYKIIR
DRNIAHIAYNNPMEFIKIVYVAPLEEVVSKTYDNWTSFATSFGMKMAILTGDVQVDTKIL
QKNNIILCTPDRYNNLSKKWRRKKIFQSINLYVFDHMELLDLSEGSMMEVVISRVRYIAT
QLELGKSQRGRKSNTNTASSSSEGKLKLPPFVELNLGDDRIREKGGGTGDASHNLNKMQH
LSMDDIYENIGVNRIVCLSSCSINNCKDIGEWIGCKKSDYYNFLSSVRNVPIEIYLHAVS
IMNKQNRYLSMQRQVYQTVRKLKKKNAIIFVTEDKMCKTLALDLVLSACNDGCSFFSNLG
GSTGKENLEDHLQDRLLVELLKQGVGYLYRNMNEMERKVVEALFDKKAIQLLIVAHDYVY
RLNVYGNVVILLDTIITHFDGKEEDYSIQSVLQMLSYAGREGEDTKSFVYIYTYITKKEY
YKNFIYEPLTVESNMEDNLPNFLNNEIVMNTIENYQDAIDWITWSFFYRRIRKNPNYYGL
KGVSNEHISDYLSELIESNIELLSFANCVLVEEGEDSKQGKKARNEITHSGEGAISGSVS
IKPCNLGIIASYYNIDYHVIHFFNQYVLSLKGLKKNRILEIVCLSSVMSEVVKMSNYDVM
LCVKIAQTCNMKVTSEFLKLSISTESITGKNSLLSGDDPDGQSNHLNKSGENDKKEQYIN
LVNFISNPMYFTPHLKALIILQAHIHRYSIPINYVEETKRVLQKTFKLINALIDVISSNN
ILNFCLFVMEISQMLTQSMNRTDESNLMQLPHFDEDLIKKAKELEIGDVYDLINAEDEQR
EELLNGLSEKEKSEIANVCNIFPVIEVHYDIDLEKKYKVNEIATLNLTVERDLVQDDPDA
TANCFAHSLYLPFEKEELWWVVIGIKKMNLLLSIKKQSLVKAVNNLKVNFELPDQPGRYD
VVIYIINDCYVGCDQEYEFSIDVEA
NT seq
7818 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagtatgaaaagtacaagcggtttgagtaccgcatgaattccaacctggtc
ctccagagggagggccccattcctaatttcaatgagcctacgggtgagagcgaaagtctg
gtagggaaattgaagcataagatgggcgacaaggtagagtacacgaagcctactagccaa
ggtaggagaacagatgaaggatataggagaagcaacaagaggaaggaatttatcttcgat
gaaagcaggaagaaagttaaaagaggatccagtacgagcgttaaagatagaagtgtattg
aacattaacctgcaggatatatttatgtataagccaagcaccaagtacacggagaaaata
ttctccaatgtaatggggatggttagaggcatcattggagaccacaccggtgacatcatt
aacagtgcatgtaacgaagtacttcatattctgaagaacgataagttaagcaatgaggag
aagaagaaacaagtggaagatgctcttgaggtgtcgtccatgacagatgaacaatttatt
gaactgaacaattatgctagggaaatttacgattttaacagggaggaagtttttgaggag
gtggacgaggaggagggagtcgccgtggtgtttgaggaagatgatgagtatttagactat
cggagtagcacgaagggtcgagacgggagcaggagccaagaagacatggccaccacgaac
gagttgaccgatgacgaagacgatgatgatgacgacaacgacgaagaagatgatggtagt
gacgatgataatgatgatgacgatgcagatcgtcatgatagtgataatgatggagatgac
gaccaggacgaccaatctgtggaggaaaataatcttggagaggaagacgacggaaacgac
gacgaagagggggaaggagagacgagaaaaaagaacacgaaattggaaaagaaaagtagc
ggggggaaaagctccaaaggaggcatgattatgaggacaggttctatccctatgaagaaa
aaaactgaaaaacaagagaagcatttaagcttgaaaggtattaaaaaagacagagatgga
aagagaaaggaaggagaggattacgatttggaaacgaattcaattgacgcacactggttg
caaagggaattaaacaaagtttttagcgatccatccttgtgtctagagaaagagaaagaa
gtgctagatgtgttaggtatctatgatatacaagaatgtgaaaacaagctagtacacatt
ctcaagtacgaaaatttttgcatggcaaaattgttgattaagaatagatggaaggtttat
tactgtacgttgcttgggcaagcccagacggagaaggagaagaaggggatcatggaagaa
atgaggaagagcgaagagggggaagagattttagaggagctttctaattttaaggcaatg
aagaggaacaaacagagcgaattcgccaagacgatgcggagggaggcggataatttgttc
aggaagcgtaggtacgggggggaggaggctacggaggagagtctccggggagatcgtttc
attcgcgaggaagacgatgatgatgatcaggatgatgatgaggaggaggatgaagacaac
ggtgatgatagtaatgatgaagaggatgatgcccctgcgaagaacgcaaagtcaggtacg
aagcaatctgtacaaacgaagaaactaagcgtgaggatgggcaagaagaaggaaaggaag
gacagtgcgggcgagcggcacgacgccgaagacgatgaagacgaagaagaagtggaacaa
ttcagagctaagtttgtcgacctagagaagatggaagtaaaacaaaagggaacgaatttt
tttaacagagaagttgtattaccagtagacagctccagagtggagaggaaagagtacgat
gagattataatttccagttcgaggagtaagaatagtagtttgaagggatcgatggacaat
gagaagtctagggggaaggagaattacttcacgaacccagatgatataaagctcgttagc
gtatcagaactacccgagtgggcacaggaagttttcacatgcgtagggattagcaaactg
aacgctatacagtcaaaggtacatgaagtagctctccacatgtatgagaagaatatgctt
atatgcgctcctacgggttcgggaaaaacgaacattgccttgttgtgtatgcttaatgtg
ataggaacatatagattacgtagtgggaatatcgacaaaaataattttaagattatatat
atatcccctatgaaggcgttggtgaatgagcaggtgcaatcgttttctcttcgactgaaa
tgcctaaatatgaaggtgagtgaattaacaggggatgtgaatttaagcagtaaggagatt
gaggagagtcaagttatcgtgatgaccccagagaagttcgaagtgataagtcggaagtgg
aatgagaagattcttttgcaaaagataaagctcatcatcttcgatgaaattcatctgcta
aatgagatccgtggaaatgttctcgaaagtatcatcagtcggatcaatcggtacgtggac
aacacgttggtctacgatggtggtgttgcgcatggggtgcagaacgaagtaaatggcgat
caacagaacgacctaaacatgcgaaggaagaagattcgtttggtgggtctgtcggctacg
ttaccgaattacgaagatgtgggtatgttcctgcgtgcggatttgcgaagtggtgtgttc
tacttcgactactcctttagaccagtccagttggagcaacattacattggtatcaaggag
aagaaaggaattaaaaagtatgccctgatgaatcaagtcacctatgaaaaggttctagaa
gaggccggaaaaaatcagatcctaatttttgtgcatagcagaaaggaaacgtaccgaacg
gccaagatgctgatagagaaatttttgaaaagtgataatctgaacaagttccttatggga
aaaaaagtatccagtgaaatattgttatcggaaaaggaggctatagtgaatgaagaattg
aaggaaattctacccttcgggtttggtattcatcacgcagggatgaagagaacagatagg
aagttagtggaagatttattttccgatagacatttacaggttctggtatcaacgagtacc
ctcgcttggggagtaaaccttcctgcacatacagttatcattaaaggtactagtgtgtat
aatataagtgtgggagattttgatgaattgtctccaatggatatcctccaaatggtaggt
agatcaggaagaccgcaatacgataaaagtggaaaggcaattatcataacagagcacaaa
aatttgcaactttacttatccttgaataatgaacagctgtctatcgaatcgacgttaatg
aaaaacatagtgaatgttataaattcggagatcgttttaaaaaacatacaaaacattaag
gaaggagtgaactggttccgttatacttatctgtacatacgtatgatgaaaaatccagaa
ttgtatggaatattcgggaagaatgagaaaatggaatccatatattttgaacaaggtaaa
gaaaataatatatctgacttgttcatggaaaaattaaataaaaaaatttacaacataatt
tactctgcttttataaccttggagaaatacgatctggtgaaatataataagaagctgaac
actgtgagtagtacatatataggaaggatcagtagctactattatgtggattaccgatct
attgatctctacagtaagaagctcaacaagcatactaatgagacggagttgttaaaaatt
ttcggaatgagtgatgaatttaagcacatctttgtaagagaagaagagaaacttgaattg
tctgtaataatggagaagctacctatcccattgaaggagtcaataagtattccgcacaca
aaaattaatattctattacagttgtacctatccaatgtaaccctaaatggatatgttatt
aacgcagacttgatatacatacaacaaaacgccttaagaattttcagagctttttttgaa
atttcgttgaaaaagaattcctaccatttaagtgcgctgacattgaaattttgcaaaatg
gtagagagaaaaatgtggggtaccatgtctcctttgaggcagtttggtctccttagcaat
gagcttataagaattatagagaaaaaaaatattacgttcaggaattacctaaacatgagt
ctcaatgagtacataacaatttttaaaaataaaaaaattgcaaagaacgtatacaaattg
gttcatcattttccgaaaattgaattgaatgcatatatacagccgattaaccatagaatg
ttgaaggttgaattgaatgtcactcctgattttatatacaatccaaagtatcatggtaat
tttatgttgttttgggtttttgtcttcgacatttccagcgagagtatgttacattacgac
ttatttagtttgaagcggggtggagttgcgaattcggcaaatataaatgctttcaatgaa
acttcacagttgtataaagagggggagcagtcaggcgatacactggatgatcatttgcta
accttcttcgtaccgataaatgagaatccattttatatcgtaaaggtggtatctgacaaa
tggttagaatgtgagagtacaataaatttgtacttgaaggatataatcttgccctccaag
gtttccttctctacaccactcctcgatttgcaagcattgccagttaacaccctcaagttt
gaagaggcgaagaaatttttccacagtcggaatattacacattttaaccctatccacaca
cagatatttccatccgtgtatgaaatgggtggcaatgtaataatatgtagctctcctggt
aggtactacctaaccccagccgaatttgccatcttgaagatgatccgttctgtcatggag
ttgaattctttcattaggaggtatataaaaaaggaagatgatttatacaaaattattcgc
gatcgaaatattgctcatatagcttacaacaaccctatggagtttatcaaaattgtctat
gtagcccctttggaagaagtcgtatcgaaaacgtatgataactggaccagctttgcaacc
tcctttggaatgaagatggctatactgacaggcgatgtacaggtggatacgaaaatttta
caaaagaataatataattttgtgcactcctgatagatataataatttgtcaaaaaaatgg
agaaggaagaaaatttttcagtcgataaatttgtatgtatttgatcatatggaattgttg
gacttgtcggaagggtctatgatggaagtcgtcattagtcgggtgagatacatagcgacc
cagttggagttagggaaatcgcaacgaggaaggaaaagcaacacgaacacagcttcttca
tcttcggaggggaaattgaaattgcctccgttcgttgaactaaacttgggagatgataga
ataagagagaagggaggaggaacaggagatgcatctcataaccttaacaaaatgcaacat
ctcagtatggatgatatttacgaaaatattggggtgaatagaattgtgtgtttgtccagc
tgctccatcaacaactgcaaggatataggggaatggattggatgtaagaagagcgactac
tacaacttcttgtccagtgtaagaaatgttcccatcgaaatttacctgcacgctgtgagc
atcatgaacaaacagaatagatacctgtccatgcagaggcaggtataccaaacagttagg
aaattgaaaaagaagaatgccatcatcttcgtaacggaggataaaatgtgtaaaacgttg
gcgctcgatttggttctttctgcatgtaatgatggttgtagttttttctccaatttggga
gggtctactgggaaggagaatttggaggatcatctgcaggataggttgttggtggagtta
ctgaaacagggagtgggttacctgtaccgaaatatgaatgagatggagagaaaggttgtg
gaggctctctttgacaagaaggccatacagttactcatcgtggcacacgactacgtgtat
aggttgaacgtttatggaaatgtagtaatattgttggacaccataattacccatttcgat
gggaaggaggaggattattccattcagagtgttctgcagatgttgagttatgcaggtcgg
gagggagaagacaccaagtcgtttgtttacatatatacgtacatcaccaagaaggagtat
tacaagaatttcatttacgagcctctcactgtggagtccaacatggaggataacctacca
aactttttaaacaacgaaatagtgatgaatacaattgaaaactatcaggatgctatcgac
tggatcacatggtctttcttctatagaaggattaggaagaaccccaattattatggattg
aaaggggtatccaatgagcatatatctgattacctgtcggagcttattgagagtaacatt
gagttgctctcctttgctaactgtgtgttggttgaagagggtgaggattctaagcagggg
aaaaaggcacgaaatgaaataactcatagtggagaaggagctatcagtggttctgtctcc
attaagccatgcaatctgggtatcattgcttcgtattacaatattgactaccatgtaatc
cactttttcaatcagtacgttttatccttgaagggattgaaaaaaaacagaatattggaa
attgtatgtctttccagtgttatgtctgaggtggtaaaaatgagcaactacgatgtgatg
ttgtgtgtgaaaatcgcacagacatgtaacatgaaagttacttctgagtttttaaagctt
tccataagtactgaatctataacggggaaaaatagccttctttcaggggatgatccagat
ggacaatcaaatcacctgaacaagtcaggtgaaaatgataaaaaagagcaatacataaat
ttagtgaattttatttccaacccgatgtactttacgccccatttgaaagcactcattatt
ctgcaagcacacattcatcggtatagtattccgataaactacgttgaggaaactaaaagg
gttctccagaaaacatttaaattaattaatgcactgatagatgtaattagcagtaacaac
attttaaatttctgccttttcgttatggagatatcgcaaatgttgacacagagcatgaac
agaacagatgaatcgaacctgatgcagttaccacactttgatgaagacttaataaaaaaa
gcgaaagagttggagataggagatgtgtacgatttgatcaatgcggaggatgaacagaga
gaggaactcctgaatggattgagtgagaaggaaaaaagtgaaattgctaacgtgtgtaac
attttccctgttattgaggtgcactacgatatcgacctagagaaaaaatacaaagtcaat
gaaattgctactctgaatttgacggtagaacgggacttggtgcaagacgaccccgacgcg
actgccaactgttttgcacactcactgtacctcccctttgagaaggaagagctgtggtgg
gttgtcattgggatcaagaaaatgaacctactgctttctataaagaagcagtctctcgtc
aaggccgttaataatttgaaggtgaactttgagttgcctgaccaacccggtcgctacgat
gttgtcatctacattataaatgattgctacgtgggttgcgatcaggagtacgaattttcc
attgacgtggaggcgtga
DBGET
integrated database retrieval system
