Plasmodium knowlesi: PKNH_0514600
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Entry
PKNH_0514600 CDS
T01094
Name
(RefSeq) eukaryotic initiation factor 4A-III, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03013
Nucleocytoplasmic transport
pkn03015
mRNA surveillance pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_0514600
09122 Translation
03013 Nucleocytoplasmic transport
PKNH_0514600
03015 mRNA surveillance pathway
PKNH_0514600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkn03019
]
PKNH_0514600
03041 Spliceosome [BR:
pkn03041
]
PKNH_0514600
03009 Ribosome biogenesis [BR:
pkn03009
]
PKNH_0514600
03012 Translation factors [BR:
pkn03012
]
PKNH_0514600
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PKNH_0514600
Messenger RNA biogenesis [BR:
pkn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PKNH_0514600
mRNA cycle factors
Stress granule specific factors
PKNH_0514600
Spliceosome [BR:
pkn03041
]
Complex C
Other components
EJC/TREX
PKNH_0514600
Ribosome biogenesis [BR:
pkn03009
]
Eukaryotic type
90S particles
Helicases
PKNH_0514600
Translation factors [BR:
pkn03012
]
Eukaryotic type
Initiation factors
eIF-4
PKNH_0514600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
BATS
CMS1
Bac_DnaA
Helicase_RecD
AAA_7
Motif
Other DBs
NCBI-GeneID:
7319405
NCBI-ProteinID:
XP_002258277
UniProt:
A0A5K1UZN9
A0A384KFZ9
LinkDB
All DBs
Position
5:669032..670204
Genome browser
AA seq
390 aa
AA seq
DB search
MEKEENYRMSEKYEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILSGRDVILQ
SQSGTGKTCVFAVGALNCVNRNLSETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCI
GGKKMSDDIKALNNGVHIISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQV
YDIYRFLSPNTQIVLSSATLPQEVLEITNKFMHRPVKILVKRDELTLEGIKQFFVSIEKE
QWKYETLADLYESLTITQAVVFCNTKMKVDWLTKKMQEANFTVCKMHAGMSQSERDDIML
KFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFV
KNDDIKILRDIEQYYSTQIDEMPMNITELL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaagaaaattacagaatgtcggagaagtacgaaatatgtacgagcttcgaa
aacataggaattgatgaaggtctattgagggggatttatgcatacggatttgaaaaacca
tcagccattcagcaaagaggtatcaaaccgattctaagtggcagagatgttattttgcaa
agtcaaagcgggacaggaaaaacttgtgtctttgcagtgggtgcactaaattgtgttaac
cgtaacttgagcgaaacgcaggtgattatactgtctccaacgagagagctagcagaacag
acgcagaaggtgtgcctggcattagcagattatatacatgtaaccatatactgttgtatc
ggaggcaaaaaaatgagtgatgatataaaggccttaaataatggagtgcatattattagt
ggtactccagggagaatttaccatatgctaaacttgaggcacttaaagtgcaagtacata
aagcaactagttattgatgaggcagacgaaatgttgaacaaaggattcaaagaacaggtg
tatgacatttatcgttttttgtctccgaacacacagatcgtactatcgtcagccacactt
ccacaggaggtgttagaaataacaaacaagttcatgcacagacctgtgaaaatcttagta
aagagagatgaactaactttagaaggaataaagcaattttttgtttccatagagaaagag
caatggaaatatgaaacgcttgcagatttgtatgaaagcttaaccatcacccaagcggtt
gttttctgtaataccaaaatgaaggtagattggttaacaaaaaaaatgcaggaggcgaat
tttaccgtttgtaaaatgcatgcagggatgagtcaaagtgagcgagacgatatcatgtta
aagttcaggcagtgtaaattccgtgttcttatatcgactgatatttggggaaggggtcta
gacgtacaggaagtctcccttgtcgttaattatgatttgcccaactcgagagaaagctac
attcaccgcatcgggagaagtggccgatttgggaggaagggtgtcgccatcaactttgtt
aaaaatgacgacataaaaattctcagggatatcgagcagtactactccacgcagattgat
gaaatgcctatgaacatcacagagctgctctaa
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