Plasmodium knowlesi: PKNH_0601200
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Entry
PKNH_0601200 CDS
T01094
Name
(RefSeq) DNA polymerase delta catalytic subunit, putative
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03030
DNA replication
pkn03410
Base excision repair
pkn03420
Nucleotide excision repair
pkn03430
Mismatch repair
pkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKNH_0601200
03410 Base excision repair
PKNH_0601200
03420 Nucleotide excision repair
PKNH_0601200
03430 Mismatch repair
PKNH_0601200
03440 Homologous recombination
PKNH_0601200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkn03032
]
PKNH_0601200
03400 DNA repair and recombination proteins [BR:
pkn03400
]
PKNH_0601200
Enzymes [BR:
pkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKNH_0601200
DNA replication proteins [BR:
pkn03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
PKNH_0601200
DNA repair and recombination proteins [BR:
pkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
PKNH_0601200
MMR (mismatch excision repair)
DNA polymerase delta complex
PKNH_0601200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
E2-Crich
REV3_N
C6_DPF
Motif
Other DBs
NCBI-GeneID:
7319803
NCBI-ProteinID:
XP_002261685
UniProt:
A0A5K1V7G7
A0A384KIY6
LinkDB
All DBs
Position
6:54207..57497
Genome browser
AA seq
1096 aa
AA seq
DB search
MESMQKCPFTSVIPYGMLYEKLKKEKNNQLPENVVIEQFDQLLTTYERPSPYDANGQICI
SNQSDLFLFQIDIEYTVDNIFKNMVSMNDGTPNGSALADIFSTYRSMLQNSEKNYISVPV
IHIYTVTNDGYSALVSVHNFFPYFYVEMPSNFQKEDLLKLECMMNDNLNMNNQYKMYEQK
IMNIEIVKTESLMYYKREGKKNFLKITVLLPKMVPTLKKYFEGIVNVNGKNIGGIVYEAN
LPFILRYIIDKKITGSSWLLCKKENFYIRPRHKKISNCSFEIDISFEHLEPMPLENEFQQ
IPKLRILSFDIECIKLDGKGFPEAKNDPIIQISSILYFQGDPIGKCSKFIFTLKECASIP
GSNVIWFHDEKTLLDAWNEFITRLDPDFLTGYNIINFDLPYILNRGTALNLKKLKMLGRI
KNISSVVKDSNFSSKQFGNHETKEININGRIQFDVYDLIRRDYKLKSYTLNYVSFEFLKE
QKEDVHYSIMNDLQNESPESRKRIATYCIKDGILPLRLIDKLLFIYNYVEMARVTGTPFV
YLLTRGQQIKVTSQLYRKCKELNYVIPSTYIKSGSNEKYEGATVLEPIKGYYIEPISTLD
FASLYPSIMIAHNLCYSTLVKNNSEIEGLEQEDITSIQGKSNIKFVKKSVKKGILPMIVE
ELIDARKKVKLLIKNEKNKITKMVLNGRQLALKISANSVYGYTGAASGGQLPCLEVAVSI
TTLGRSMIDKTKESVEKYYNKSNGFEHNCTVVYGDTDSVMIKFGTSSIAEAMALGKDAAQ
RISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTTPEKHDKMDCKGIETVRRDFCILIQ
QMMETVLNKLLIEKNLDSAIEYTKSKIKDLLTNNIDMSLLVVTKSLGKTDYETRLPHVEL
AKKLKQRDSATAPNVGDRVSYIIIKGVKGQAQYERAEDPLYVLDNNLAIDYNHYLDAIKN
TLSRIFEVIMNNSDSLFCGEHTRHKTILTSSQTALSKFLQKAVRCIGCNSSIKKPPLCNH
CKSNKELSIYMQKMNNFKKKQNEFFQLWTECQRCQGNLHAEVICMNRDCPIFYRRAKIKK
DMANVQEQITALRADW
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggagagcatgcagaagtgccccttcaccagtgtcatcccgtacgggatgctgtacgag
aagctgaaaaaggagaagaacaaccaacttcccgagaacgtggtgatcgagcagtttgac
cagctgctgacgacatacgaaaggccgagcccctatgacgcaaatggacagatctgcata
tccaaccaaagcgatttgttcctcttccagatagacatagaatacacagtggataacatc
ttcaagaacatggtctccatgaatgatgggacaccgaatggaagtgccttagccgatatc
ttctctacttaccgaagcatgctccaaaacagtgagaagaactacatctccgtgccggtc
atccacatttacactgtaaccaacgatggctatagtgcgcttgtcagcgttcacaacttt
ttcccctatttttatgtggagatgccaagcaacttccaaaaggaagacctcctaaagctc
gagtgcatgatgaatgacaaccttaacatgaacaaccagtacaaaatgtatgaacagaaa
attatgaacattgaaattgtgaaaacggagagtctaatgtattataaacgagaaggaaaa
aaaaacttcctaaagatcaccgtccttcttcctaagatggttcctacgttgaaaaaatat
ttcgaaggtattgttaatgtaaatggaaaaaacatcggtgggattgtatatgaagccaac
ttgcccttcattctacgttatataattgataaaaaaatcaccggttcttcttggctactc
tgcaaaaaagagaacttttacattcgaccaagacataaaaaaatatccaactgctccttc
gaaattgatatatcctttgaacatctagaacctatgccactagagaacgaattccagcaa
atcccaaagttaagaattctatccttcgatatagagtgtatcaaactagatggaaaggga
ttccccgaagcgaaaaacgatcccatcatacaaatatcttccatcctctactttcaagga
gaccccattggaaaatgctctaaatttatcttcaccctaaaggagtgtgctagtatccca
ggttctaatgtcatatggttccacgacgagaagaccttactagatgcatggaatgagttt
atcacaagactagatccagatttcctaactggttacaacattataaattttgatttacca
tacatcttaaacagaggcactgcccttaacttgaaaaagttgaaaatgttaggcagaata
aaaaacatcagtagtgttgttaaggattccaacttttcatcaaaacaatttgggaaccat
gagaccaaggaaattaacataaatggaaggattcaatttgacgtatacgatcttataagg
agggattacaaattgaaatcgtacacattaaattacgtctccttcgaatttctgaaggaa
caaaaggaagatgtgcactatagcattatgaatgatctgcaaaatgaaagcccagaatcc
agaaagagaatagctacttattgtataaaagatggaattcttcctctacgtttaatagat
aagttattgtttatttacaactacgtagaaatggcaagagttacgggtactcccttcgtt
taccttctcacaagaggccaacaaataaaggttacctcacagctctatcgcaaatgcaaa
gaattgaattatgttatccctagtacgtatataaaatctggtagcaatgaaaaatatgaa
ggtgctacggttttagaacccataaaagggtactacatagaacccatttcgacgctcgac
tttgcatccctatacccatctatcatgatagcacacaatttgtgctactccaccttagtc
aaaaacaactcagagatcgagggactcgagcaggaagatatcacctccattcaaggaaaa
agcaacatcaaatttgtaaagaaatctgtcaagaaaggtatcctccccatgatcgtagaa
gaattaatagatgcaagaaaaaaagttaagcttctcatcaaaaatgaaaaaaataaaatt
accaaaatggtacttaacggaagacaactagcactgaaaatttcagcaaactctgtctac
ggatacacgggtgctgcctcaggggggcaactaccctgtctagaagtcgcggtatctatt
acaacccttggaagatctatgattgataaaacgaaagaatctgtcgaaaaatattataac
aagagcaacggatttgaacacaactgcaccgtggtttatggagacacagactcagtgatg
atcaaatttggcaccagcagtattgccgaagcaatggccttagggaaggatgccgcgcaa
aggataagcaaagagtttctgcacccaataaagctagaatttgaaaaggtttattgtccc
tacctattgcttaacaaaaagaggtacgcagggttgctctacaccacaccagaaaaacac
gacaaaatggactgcaaaggaattgaaactgttaggagggatttttgcattctcatccaa
caaatgatggaaactgttttgaacaaactcctgatcgagaaaaacctcgacagtgcgatc
gaatacacaaaaagcaaaattaaggatctactcaccaataacatcgatatgagtctcctc
gtggtaacaaaatccttaggaaaaactgattatgaaacgagacttccccacgtggaattg
gcaaaaaagttaaaacaaagagacagcgccactgcaccgaatgtaggagatcgtgttagc
tatattattatcaaaggggttaaaggacaggcacaatacgaacgagcagaagacccactc
tatgtcctagacaataatctagccattgattataaccactacctagatgctattaaaaat
actctctcaagaattttcgaagttattatgaataattcagactcccttttctgtggtgaa
cacacaagacacaaaaccattttaacatccagccaaactgctctgtccaaatttctacag
aaggcagtcaggtgcattggatgtaacagttccatcaagaaaccccctctttgcaaccac
tgcaaatccaacaaggagttgtccatctacatgcaaaaaatgaataattttaaaaaaaaa
cagaatgagttttttcagctatggactgagtgccaacgttgtcagggaaacctgcacgct
gaggtcatctgcatgaatagggattgtcccatcttttacaggagagccaaaattaagaag
gacatggccaacgttcaggagcagataacagctctccgcgccgactggtga
DBGET
integrated database retrieval system
