Plasmodium knowlesi: PKNH_0608400
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Entry
PKNH_0608400 CDS
T01094
Name
(RefSeq) SNF2 helicase, putative
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pkn
Plasmodium knowlesi
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkn03021
]
PKNH_0608400
03036 Chromosome and associated proteins [BR:
pkn03036
]
PKNH_0608400
Transcription machinery [BR:
pkn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PKNH_0608400
Chromosome and associated proteins [BR:
pkn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PKNH_0608400
SLIK complex
PKNH_0608400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Chromo
ResIII
DEAD
HTH_Hrp3
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-GeneID:
7319765
NCBI-ProteinID:
XP_002261756
UniProt:
A0A5K1TZZ9
B3L200
LinkDB
All DBs
Position
6:complement(387124..396747)
Genome browser
AA seq
3207 aa
AA seq
DB search
MNSSMQHNMSGSNPGGSGGSSANMRDAMHYSEMMEGDNAGGVKGTGAHNSYMNQVNSSKN
LPCTSPPSSYMNNSNNINMGKGMHFNPMSSGGDGTISITSSLLSNNEQSMQMRQSMGMSK
NCGGASTGGANASGGGMHEPYQKPILSNYNMQVQSSMGGHHHHMVSGNQTGGNGTNQMGG
RYNNMSYPMQDMNSNVHMNTGKGLHTNGEMKHSNKDPNFLGTNNMKQNTFVNNMYYQRND
MMLRNSSNSYNMHGNYYGYMNNGYYGGPSASTNCFKQNANMMNTGNGASNSSGSSNGANY
TDSLNAGNHGEGGLNSKLSGKGPGSMADKSASLKSIQGGNASSSCGGMNASQLNMGSRPL
SGSGMNSIGGSNTNGNNDNSYNNSAGNNNLCAKSMNKGTTGVGGTGGMNVDSTGMPNNVM
MHMVNNNVMMNNKVMSSMMMGNSGGGSGGAKNAMGGAGGMPGMNMAGVNMGGMNMGGMGG
MGSMSNMGSMGGMGNMHGKGMNGMPTHRPNSVMEKANSLGDVNNMRYHHPIGGGGSNMYN
KMGFNNLSEYPYDNYATNHMSAKSECGSMSKDSKGALGGKNGMKHGKGSKSIKDELLEKD
DTMGMMNSSSLLCDGQTTGGGTSTRKGKATVGAGGGVASASMEQFNSGGMMSSDQQLGGG
MYKKYNKNGDNQIDVKDKKMGSSNNNGNVVSGGGEPGINTGSNHPYNMFPNYNIKYPMNV
DMFGTMGTSNPYGMSNKGGGGTYPNMNLMNGMSGTNGANEMASSGGNVNTSGGISYGGMN
KVSSINNYNMMNAYGDNRYSNLKSMDQMKSYNDGMVMGGGGGGTGGGPAGAVGQHGSSNL
GSMMSMGSIGNVGNYNSLNSFMQSRNYPNEMSMRMMNSRGMMGVNNPANMCNNQSGMMMM
SGGGGVGAGGVGMHANPSSAAAPRFKNEEVDEDEYEDEDGHDGSDLYGGSKYTKKSASGK
QTNRGKKSETQKKDKKKKKKKKNANNSLDTDEDEDNDLYVNTYAKKSHTRSSSKKSQMYD
PVEDRYNEKAKRNEKNDIFVSPYIGAVEGRTNLRERRKVRNYAQMESYFETDEEDKKVDE
EKMLLRQEKQIMGGIDRVLHHRRIVDYKNVNSIKNNPFLYINKNKGNGAGSGATGNGANK
SATDGNGGNKSATDGNVAVEGGVGDGAVGEGAVGEGVVGEGVVGEGVVGEGVVGEGADGK
VGAVNEHEDQAMDDFYEEEDIEDISQVEFLIKWLGKSHIHNFFCTYEYLRLFNGLKKVDN
YIKKIRQSFQKRKYMTADEIEQEKIYSEIKKQIEMDAINAERIVSHRLCDETGEQLFLVK
WMSCAYDQCTEETRQTLVDHGFTKLIEEYFDRESKICGLKAFSSVWNRGPLTATKFDPYN
ETPFYLNEKKLRAYQLTGLNWMVSRMKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLI
GPYLVIVPQSTVDNWLNEFKSWLPQANVVCYHGNAVSRELIRTHELKKVYVANKGFRYKF
DVCITTPSILNSLSDVELLKKMPWQLMVVDEAHQLKNRQSKRFIELKQFMAESKLLLSGT
PLHNNLEELWTLLHFLNPQQYTHYENFQKKYNEIENTSLIGEAKQKQLMQLQHELHEVIL
RRVKKDVEKSLPNKVERILRVELSPIQIEFYKNILTKNYEQLAKASGGAKNSLQNICMEL
KKVCNHPFLCCEPVDKDEYKERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNIL
SEYLTLRGFKHQRLDGTMSKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVI
IYDSDWNPQNDLQAGARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGL
NKKQNDNVNYIGGEGGNTSNGFTREELSKILKFGAQKLWEKNSSKYSPQKMDEEKAVIKG
VDVDLDKILEEAEAHENANNANKDLNSEFNSLHNSNNLFASGNSLFGSGTPGSPSGGGTV
GSGGIADDLLSSYNNITEFKYEPPANLKSNIYNDSTKADDLEEEEGNDKDFWDRTIPLEE
RLKLKRMKEEELLVHGPRKTRTRDHRHNLYVESANTQTMNDEDDDSEEYTVKYHDKNKNL
KKKRKRRTSTHITEKDKFRLYRSLMKFGNPYLRLDDIRVDSKLTKVDQNVILTELNIIVD
TCKEIVERVAKENSLKVNEENAMAARDGIEGAGVVDAAGGVVDEEEEEEERAVKRMKDEA
DIKLLKEEENNNTTTTTDSNHLTVGSCDDSSGKKLEEGADDAGVVADHGADSVQSDEGKK
TPRGMKENKSSFKGGSADAVGGDGEEDAVAEAEAEDGNAQGAGASAGGGLFSKFLNLVKG
QGGEEKVEETKEEMKKEGKEVEELNGKENDNNSNEESDGNNKTKGTERTRKVDAYTFYIG
TNRANALDLCQRLQLFKSLHEFVKEQNGGNEYSFRLPLRANSSAITDVASGVVEDGKKSH
LLEEKNESGGEVKAEMKVEMKEEVKAEMKAEEGEVKVEPVGNALSEAPTETKDEMNDYLK
LKLPDYIFNHLRDLATKDVKAWSKEDDENLIKGVYVYGFGSVNEICADVNLNLSHIKNVK
CDKVKVRCVRILKMIDEFHCNVKDDTTSRKRRRVRNRSRNNEVTKGVEGKGVGTSGGATN
YKKVKQEEEEAGEGDAVTESTGGAASLAKGSNGSNHRQSYYSRRSSERVKAIYMNDEKEE
GVVTKKRAIYPSGGSLKRGEKVEKVEHINGAESTPQNERRKGGTRSGSVAKGERSANQNN
NNSSSSVGILGSMVSVGSMGSLGSNTLNSRKSKNHPRGGEGSECGSSNENKSFVSKEDGE
QGVKGIMGSAEIGEGSMTRRRSNRSISVKKYNTADNEGGKMTRRKSSRVRRGRNDVSSSP
LSAGKDNALASNEGEYFDSYADLSIDPEGGAGGEIGTLEVEDEMDGQVNEQMDEQLDEQL
DEQMDEQMDGEQRKREKKHSKKKKKKKKLSDDEVLHKIRSCNLKEMNQHSMNKLAKKYVK
KHKKLLRVVKKITQLGEQDILHLQEQEQTAGEAADQGSSSSATRTSALDKWKSPEIKEKI
NEFILFIGNHIRKIGDVCPDKECGEILSRSGWEYVSKFLGETSESLQEKYAEGQREWQAK
ESSQLEQSKDNEDGVNCQGSITEDDLVAFFFSKRISNMCRLQGVEEAEEEDEDDEDDDEH
SHEQLHGQSHDQPRRGRSMTNINFELE
NT seq
9624 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtccatgcaacacaacatgagtggcagcaatcccggcggaagcggtggtagc
agtgccaacatgcgtgatgccatgcattatagcgaaatgatggagggggataacgcaggt
ggggtgaaaggcacaggggcacacaacagttacatgaaccaagtaaacagtagcaagaac
ctaccctgtacatcccccccatcttcttatatgaacaattccaacaacatcaatatgggt
aagggtatgcatttcaatcctatgtccagtggtggggatgggacaataagtattacgagt
agtctactaagtaataatgaacagagcatgcaaatgaggcaatcgatgggaatgagtaaa
aattgtggaggtgcctctaccggaggtgctaatgcatctggaggagggatgcacgagcca
taccaaaaacccattttatcaaactataacatgcaagttcagtcatccatgggaggccat
caccaccacatggttagtggtaatcagacaggtggcaatggcactaaccagatgggaggt
agatacaacaacatgagttatcctatgcaggacatgaattcaaatgttcatatgaacact
ggaaagggtctccatacaaacggcgaaatgaaacatagtaataaggatcccaattttttg
ggtacaaataatatgaaacagaacacctttgtgaataacatgtattaccagaggaatgac
atgatgttaagaaatagctccaatagctataatatgcatgggaactattatgggtatatg
aataatggctattatggtggcccttcagcatccaccaattgttttaaacagaatgccaac
atgatgaataccggtaacggggctagtaacagtagtggtagtagcaacggtgcgaactac
acggatagtttgaatgcgggtaatcatggagagggtggcctgaacagcaagttgagtggt
aagggccccggaagcatggccgataaatctgcttctttgaaatctattcagggcggtaac
gccagtagtagttgtggtggtatgaacgcaagtcaattaaatatgggaagtaggcctctc
agtggtagtggaatgaactccattggagggagtaacaccaacggtaacaacgataacagt
tacaacaacagcgctggtaacaacaatctgtgcgcgaagagcatgaacaaagggaccacc
ggtgttggtggcacgggtgggatgaatgtcgactccacggggatgccgaacaatgttatg
atgcatatggttaacaacaacgttatgatgaataacaaggtgatgagtagcatgatgatg
ggtaatagtggtggtggttcagggggggcgaagaatgccatgggaggggccggaggtatg
cccggtatgaacatggcaggtgtaaacatgggcggcatgaacatgggtggcatgggtggt
atgggtagtatgagtaatatgggtagtatgggtggtatgggaaatatgcatggtaaagga
atgaacggtatgccaacccaccgacccaacagcgtgatggagaaagccaattctctgggt
gatgtaaacaacatgagataccaccatcccatagggggaggaggcagtaacatgtacaac
aaaatgggtttcaacaatttgagtgaatacccttatgataattatgcaacgaaccacatg
tctgctaagagcgagtgtggctcaatgagcaaagatagcaagggtgctcttggaggaaag
aatggaatgaagcatggaaagggtagcaaaagtataaaggacgaacttttagagaaggat
gataccatgggcatgatgaacagttcctccctcctgtgtgatggccaaaccaccggtgga
ggaacatctaccaggaaggggaaggcaactgtaggtgcaggtggtggagtagcgtctgcc
tctatggagcagttcaatagtggtggaatgatgagcagtgatcaacaattgggaggaggg
atgtataagaagtataacaaaaatggagacaaccaaattgatgtaaaggataaaaaaatg
gggagcagtaacaacaacggaaatgttgttagtggaggaggagaaccaggcataaatact
ggatcaaatcatccatacaacatgttcccaaactacaatataaagtatccaatgaatgtt
gatatgtttggaaccatggggacgagcaacccatatggcatgtcgaataaaggaggagga
gggacttatccgaacatgaatttaatgaatgggatgagtggaacgaatggagcaaatgaa
atggctagcagtggtggaaatgttaacacgtctgggggaatttcttacggagggatgaac
aaagttagtagcattaacaactataatatgatgaacgcatatggagacaataggtacagt
aacttaaagtccatggatcagatgaagtcgtacaacgacggtatggttatgggcggagga
ggaggaggaacaggaggaggaccagccggagcagtagggcaacatggaagtagcaaccta
ggcagtatgatgagcatgggtagtatcggtaacgtaggtaactacaacagcttgaacagc
ttcatgcagagtaggaactaccctaacgaaatgagtatgcgtatgatgaacagtagaggt
atgatgggggtgaacaaccccgcgaacatgtgtaataatcagagcggaatgatgatgatg
agtggtggaggaggtgttggtgcaggtggagtaggaatgcacgcaaatccaagtagtgcc
gccgccccaaggtttaaaaatgaagaggtggacgaagacgagtacgaagatgaggatgga
catgatggatcggacctctatggaggtagtaaatatacgaagaaaagtgcatctggaaag
cagacgaacagaggcaaaaaatcggagacacaaaagaaagataagaagaaaaaaaaaaaa
aaaaaaaacgcaaataactctcttgatacagatgaagatgaggacaatgatctgtacgtt
aacacgtatgcgaaaaaatcccatacgaggagcagtagtaagaaatcccagatgtatgat
cctgtggaggaccgatacaacgaaaaggcaaaacgtaatgaaaagaatgatatttttgtt
tctccatatattggcgcagtggaaggaagaacgaacttgagggagaggaggaaggtgaga
aattacgcacagatggagagctactttgagacagacgaggaggacaagaaggtagatgag
gaaaaaatgctcctcagacaggagaagcagatcatgggaggcatcgaccgagtgttgcac
catagaagaatcgtcgactacaaaaatgtgaatagtataaagaacaaccccttcctgtac
atcaacaagaacaaagggaatggtgcggggagcggggcaactggtaatggggcaaataag
agtgccacagatggcaatgggggaaataagagtgctacagatggcaatgtcgcagttgaa
ggtggagttggtgatggtgcagttggtgaaggagcggttggtgaaggggtggtcggtgaa
ggggtggtcggtgaaggagtggtcggtgaaggggtggtcggtgaaggagcggatgggaag
gttggcgcagtgaacgagcacgaagaccaagcgatggacgacttttacgaagaggaggat
atcgaagacataagtcaagtggagttcctaatcaagtggttgggcaagtcgcatatccac
aactttttctgtacctatgaatacctgagacttttcaatggacttaaaaaggtggacaat
tacataaagaaaataaggcagtcttttcagaagaggaagtacatgacggcagatgaaata
gagcaagagaaaatttattccgagattaaaaagcaaattgagatggatgcaataaacgca
gagagaatagtatctcacagattgtgtgatgaaaccggtgaacaattatttcttgtcaag
tggatgagttgtgcttatgaccagtgtacagaggagactaggcagaccttagtagatcat
gggttcacgaaacttattgaagaatattttgacagggaaagtaagatatgtggattgaag
gctttttcaagtgtatggaacaggggtcctctaacagctacgaaattcgacccatacaat
gagaccccgttttatctgaatgaaaaaaagttgagagcgtatcagttgacgggtcttaat
tggatggttagtagaatgaaacgtaatttaagtgtcctattggcagacgagatgggttta
gggaaaactgttcagaccattgcagtggtgggtcatatgctatataaagaaaaattaatt
ggtccctatcttgtaatcgtgccgcaatctactgttgataattggctgaatgagtttaag
agttggcttccccaggccaatgtggtatgttaccatggaaatgctgtcagtagagaactt
ataaggacccacgaattaaaaaaagtatatgtggctaacaagggctttagatacaaattt
gatgtgtgcattacaactccatccattttgaacagtttaagtgatgtggaattgttgaag
aaaatgccttggcagttaatggtggttgatgaagctcaccaattgaaaaatcgacaatcg
aagaggttcatcgagttgaagcaatttatggcggagtccaagttgcttcttagtggtact
ccccttcataacaatttagaggagttgtggaccctattgcacttcctgaacccacaacaa
tacacgcattatgaaaacttccaaaagaagtataacgaaattgagaatactagtctgata
ggggaagccaagcagaagcaactgatgcagttgcaacatgaattgcatgaagttatacta
cggagggttaagaaagatgtggagaaatcattgccaaataaagtggagagaattcttaga
gtagagttatctcctatccagattgaattttacaagaatattttaacaaaaaattatgaa
cagctagccaaagcatctggtggagcgaaaaactctcttcaaaatatctgcatggaattg
aagaaggtatgcaaccatccctttttgtgttgtgaacctgtggacaaggatgagtataag
gaacgattggtttattcaagtggaaagatctgtctcttggaaaagctactaattagattg
aaggagagaggaaatcgtgtgctcattttttcccaaatggtaaagatgcttaatattcta
agtgagtatttaaccttacgaggattcaagcaccaaaggttggatggaactatgtctaag
gaaatgagaaagaaagcaatgaaccattttaacagtaaaaattcggatgattttgtgttc
cttttatctactaaagctggtggtttgggtattaacctaacgtctgcggataccgttatt
atttacgattcggattggaacccacagaatgatttacaagcaggggccagggcacatcgt
attggacaaacgaaaacggtgcagatatatagactggttaccaaggactccattgaacaa
accatcctagaaagagccaaagtgaaaatggttctagatacacttgttgtccagggattg
aataagaagcagaatgataacgttaactacatcggtggagaaggaggaaatacatccaac
gggttcacccgggaagagttgtccaaaattttaaaattcggtgctcagaaattgtgggag
aaaaatagctctaaatattcgcctcaaaaaatggatgaagaaaaagcagttattaaagga
gtagatgtggatttggataaaatattggaagaagcagaagcacatgaaaatgctaataat
gcaaataaggatttgaactccgaatttaatagtcttcataattcgaataatctgtttgcc
agtggtaatagtctatttggaagtggaaccccaggctcaccatcgggaggaggaaccgta
ggatcaggaggaatagcagatgacctactgagctcctacaacaacatcaccgaattcaag
tacgaaccaccagcgaacttgaaaagtaacatttataatgattccactaaggcagatgat
ttagaggaagaagaagggaatgacaaagatttctgggaccgaactatccccctagaggag
agactgaagttgaaaaggatgaaggaggaggaactgctagttcatggaccaagaaaaacc
agaacccgggaccatagacacaacttgtacgtagaatctgccaatacacaaacgatgaat
gacgaggatgacgatagtgaggagtacacggtaaaatatcatgataaaaacaaaaatttg
aaaaaaaaaagaaagagaagaacctctacgcatataacggagaaggacaagttccgactc
tacagatcccttatgaaatttggaaatccttacctacgtctagacgatattcgagtagat
tctaaactaaccaaagtggatcaaaatgttatactcacagaactaaatattattgtagat
acgtgcaaagaaattgtagaaagggttgccaaggagaactccttgaaggtaaacgaagag
aatgcaatggcggcaagggatggaattgagggagcaggcgtagtagatgctgcaggggga
gtggtggatgaggaggaagaggaagaagaaagggcggttaaacgaatgaaggatgaagct
gacattaaactattgaaggaggaggaaaataataacaccacaaccaccactgatagcaac
catttgacagtcggctcgtgtgatgactccagtgggaagaagttggaagaaggagcagat
gatgcgggcgttgtagccgatcatggtgctgatagtgtgcagtctgatgaggggaaaaag
acgccacgtggaatgaaggaaaacaaatcctcctttaaaggtggctcggctgatgctgtt
ggcggtgatggagaagaggatgcagtggcagaagcagaagcggaggatggaaacgcccaa
ggagcaggagcatcagcgggaggaggtttattttcaaaattcctgaacttggtgaagggc
cagggtggcgaagagaaagtcgaagagacgaaggaagaaatgaagaaggaaggaaaggag
gtggaggaactgaacggaaaggaaaatgataacaactccaatgaggaaagcgatggaaat
aataagaccaagggcacggaacgaacaaggaaggtagacgcctacaccttttacattggc
acgaacagagcaaacgccctggacctatgtcagcgcctgcaattatttaagagtctgcac
gaatttgtgaaggagcagaatggcggaaacgagtacagcttccgccttcccctaagagct
aacagcagcgccattaccgatgttgcctccggtgttgtggaggatgggaagaagagtcac
ctattagaggagaaaaatgaatcaggtggtgaggtgaaggcggagatgaaggtagaaatg
aaggaagaagtgaaagcagaaatgaaagcagaagaaggagaagtaaaggtagaacctgtc
ggcaatgctctgagtgaggcgcccacagaaacgaaggatgaaatgaacgattacctaaag
ttgaaattgcccgactacatatttaaccacttgagagacctcgcaacgaaggatgtgaag
gcgtggtcaaaggaagacgatgaaaatttaatcaaaggagtgtacgtttatgggtttgga
tcggtaaacgagatttgtgcagatgtgaacctaaatctaagtcatataaaaaatgtgaaa
tgtgataaagtaaaggtgaggtgtgtgcgtattttgaaaatgattgacgaatttcactgc
aacgttaaggatgacacgactagtaggaaacgtagaagggtgcgcaataggagtaggaac
aatgaagtgactaagggggtcgaagggaaaggcgtaggtaccagtggaggagcaaccaat
tacaagaaggtgaaacaggaggaggaagaagccggagagggtgacgcagtgaccgaatcc
actgggggagcagcaagcctggccaagggtagcaatggaagtaatcataggcaaagctac
tacagcagaaggagcagcgaaagggtgaaagccatctacatgaatgatgagaaggaggaa
ggagtggttacgaagaagagagctatttatccatcgggaggatccttaaaaaggggagaa
aaggtagaaaaagtagaacacatcaatggggcggaaagtactcctcagaatgagagaagg
aaaggtggcacaaggtcagggtcagtagccaaaggggaaaggagtgccaatcaaaacaac
aacaacagtagtagtagtgtgggaattttaggaagcatggtaagcgttgggagtatggga
agcttgggcagcaatacccttaatagcaggaagagcaagaaccacccaaggggtggggag
ggttcagaatgtgggtcgtcgaacgagaacaaaagctttgtaagtaaagaagatggagag
cagggcgtcaaaggtattatgggttccgcagagataggagagggcagcatgacacgcagg
agaagcaacagaagtattagtgttaagaagtacaacactgccgataatgaaggagggaaa
atgacacgaaggaagagctcccgagtgaggaggggaaggaatgatgtatcatcatctcca
ctttccgcagggaaagacaatgcacttgcgtcaaatgaaggagagtactttgacagttat
gcagacctgagcattgatccggagggaggagcaggaggagaaatagggacgctagaggta
gaggatgagatggatggccaagtaaatgagcagatggatgagcagttggatgagcagttg
gatgagcagatggatgaacaaatggatggcgagcaaagaaagagagaaaagaaacattca
aaaaaaaaaaaaaaaaaaaaaaaattatcggatgatgaagtattgcataaaattagaagc
tgcaatttgaaggaaatgaatcaacatagcatgaacaagctagccaaaaagtatgtcaag
aagcacaagaagttgctaagggtggtaaaaaaaatcacacagttgggggaacaagatatc
ctccacctccaggagcaagagcagacggcgggagaggcagccgaccaaggtagtagtagt
agtgcgactcgtacttccgcactggataaatggaagtctccggaaattaaagagaaaatt
aatgagttcatcctttttattggtaaccatattaggaagataggcgatgtgtgtccagac
aaggagtgcggagaaattttgagcagatccggttgggagtatgtttctaaattcctaggg
gagacgagcgagagcctacaggagaagtatgcggaagggcaacgtgaatggcaggcgaag
gagtcgagtcagttagaacaatcgaaggacaatgaggatggtgtaaattgccaaggatcc
atcacagaagatgacctcgtggctttctttttctccaaaaggatttcgaacatgtgtcgc
ctacaaggggtagaagaagcagaagaggaagacgaagacgatgaggacgatgatgaacac
tcacatgagcagttacatgggcagtcacacgaccaaccaaggaggggaagatcaatgaca
aatatcaattttgaattggaataa
DBGET
integrated database retrieval system
