Plasmodium knowlesi: PKNH_0715600
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Entry
PKNH_0715600 CDS
T01094
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pkn
Plasmodium knowlesi
Pathway
pkn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PKNH_0715600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_0715600
03009 Ribosome biogenesis [BR:
pkn03009
]
PKNH_0715600
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PKNH_0715600
Spliceosome [BR:
pkn03041
]
Complex A
U2 snRNP components
U2 related factors
PKNH_0715600
Complex B
PKNH_0715600
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PKNH_0715600
Ribosome biogenesis [BR:
pkn03009
]
Eukaryotic type
90S particles
Helicases
PKNH_0715600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
Flavi_DEAD
ResIII
nSTAND3
AAA_19
AAA_7
AAA_24
T2SSE
ATPase
SLFN-g3_helicase
SRP54
TsaE
Helicase_RecD
AAA_30
PhoH
AAA_29
Roc
AAA_11
Motif
Other DBs
NCBI-GeneID:
7319902
NCBI-ProteinID:
XP_002258448
UniProt:
A0A5K1V8Z1
A0A384K8P9
LinkDB
All DBs
Position
7:complement(700707..703280)
Genome browser
AA seq
857 aa
AA seq
DB search
MKPVDNALGEEDAEPANGKGDPPAPSEKAKRKNAHTLSDDYSGKKKAKVDDGLKGSDPFE
EEEEEEEEDGQMGGKENKEEVSSYDVEEDPGCSDGGGNNEGNDAKQGDHNSNESNNEEGE
TETHNEKSKDKQNNDGDTIPKEGEEEEEEDPKSETPFPRGNSMEEASYERGREPGGGEPE
PPLINKLTNEPYSERYLQLLEEKKKLPAWSAKKNFLKLFKKNDVLIIVGDTGSGKTTQIS
QFVLESKFAEKKSIAVTQPRRVAAMSVAARVSEELDVELGTYVGYTIRFEDRSSTKTVIK
YLTDGMLLRESMYDPLLKRYNTIILDEAHERTLATDILFGVIKNIQEQRNDLKLIVMSAT
LDAGKFQKFFNGSQILNIPGRLYPVEIFYTLQAEKDYIRVVIRTVYDIHVNEEEGDILVF
LTGEEEIEMTKKEIEKLVSKNENAGQLVVLPLYSSLPSTQQQKIFEPAPKPRFKGDKMGR
KCILSTNIAETSLTIEGIVYVIDPGFSKQKVYNPRARVESLLIAPISKASAQQRAGRAGR
TKPGKCFRLYTEKCFEQTLPEQTYPEILRSNLGSVVLNLKKLGIDDLVHFDFMDPPAPET
LMRALEQLNYLGALDDEGELTQKGHFMSEFPVDPQLAKVLIESPNYCCSSEILTIAAMLS
VPYCFLRPKVKGKEADEMKTRFSHLDGDHLTLMNVFHAFVNYSRMDINASKKFCYDYFLN
HRAMTSAQNVRNQLIRTMEKMELKIVSMNPSHPDYYVNIRKALLSGFYQQVAYKTSKGYY
ITVKDIQIVTLHPSTVFQINPEWVMYHELILTTKNFIRTVSRIDGKWLLEIARSYYDLDD
LPNSEAKNELRMLLRKS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagtggataacgctctaggcgaagaggacgcagagcccgcgaacggcaagggt
gaccctccagccccaagtgaaaaagccaaaaggaaaaacgcacacacattaagtgacgat
tatagcggtaaaaagaaggcaaaggttgacgatgggttaaaaggaagtgatccctttgag
gaagaggaagaagaagaggaagaggatggacaaatggggggaaaggaaaataaggaagaa
gttagttcatatgacgtagaggaggatcccggttgttcagatggcggtggtaataatgaa
gggaatgacgccaaacaaggtgatcacaatagtaatgaaagtaacaacgaggaaggagag
acggaaacacataatgagaaaagcaaagataaacagaacaatgatggggataccatccca
aaggaaggagaagaagaagaagaagaagaccccaagtcagaaacgccttttccaagagga
aactcaatggaggaggcatcttacgaaagaggtcgagaacctggcggaggtgaaccagaa
cccccactcataaacaaactgaccaacgaaccatacagtgaaagatacctgcagttattg
gaggaaaagaaaaaactgccagcatggagtgcgaagaaaaattttctaaaactctttaag
aaaaatgacgtgctaattatcgtaggagatacaggaagtggaaagacaacacagatatcg
caatttgtgttggagtctaagtttgccgagaaaaagtcgatagccgtaacccaaccaagg
agagtagctgccatgagtgtagcggcaagagtttcagaagagttagatgtagaactagga
acgtatgtaggatacaccatcagatttgaagatagatcaagcacaaaaactgtcatcaaa
tatttgacagatggtatgttattaagagaatcaatgtatgatcctttgttaaaaagatac
aataccatcattctggatgaagctcatgagaggaccttagctacggatatcctcttcgga
gttataaaaaacatacaagagcagaggaatgatttaaaattaattgtcatgtcagcaacg
ctagatgcagggaaattccaaaaattctttaatggctcccaaatattaaatatcccaggg
aggttatatccagtggagattttttatacgctacaggcagagaaggattacataagggtt
gtcatcaggacggtgtacgacatacatgttaatgaggaggaaggagatattcttgtcttc
ctcactggagaagaggaaatcgaaatgacgaaaaaagaaattgaaaagttagtatcgaaa
aatgaaaatgctggacagttggtagtgttgccactttattcatcattaccatcgactcag
caacagaaaatattcgagcctgcaccaaagccaagatttaaaggagacaaaatggggaga
aaatgtatcctatccactaacatagcagaaacgtccctcactatagaaggaattgtttat
gttatcgaccctgggttttcaaaacagaaggtttataatccaagggcaagagtagaatct
ttattaattgctcccatttcgaaggcatccgctcagcagagagctggaagagcagggaga
acaaaaccggggaaatgctttcgcctctacacagaaaagtgcttcgagcaaacactaccc
gaacagacatacccagaaattctgagatcgaacttaggttctgttgttttaaatttaaag
aaattaggaattgacgatttagttcattttgattttatggatccaccggcaccagagaca
ttaatgagagctttggaacaactgaactacttaggggcattagatgatgagggagaatta
acacagaagggacacttcatgtctgaatttcctgtagatcctcagctagccaaagtgtta
attgaatccccaaattattgttgttccagcgaaatactaacaattgcagccatgctttct
gtgccttactgttttctaaggccaaaagtgaaaggaaaagaagcggatgaaatgaaaacg
agattctcacatctagatggggaccatctaactctcatgaatgtgtttcatgcctttgtc
aattatagccgcatggatataaatgcttcgaaaaaattttgttacgattattttttaaat
catcgagctatgacatcagcccagaatgttagaaaccaacttatcagaacaatggagaaa
atggaactaaaaattgtttccatgaacccatcccatcctgactactatgtcaatataagg
aaggctttgctaagtgggttctaccaacaagtggcatacaaaactagtaaagggtactac
atcaccgtgaaggatattcaaattgttactctgcatccgtcaacggtttttcaaataaac
cctgagtgggtcatgtatcacgaacttatattaacgacaaaaaattttataagaaccgtc
agtagaattgatggtaagtggttgcttgaaattgctagaagttattacgatttggatgat
ctaccaaacagcgaggcaaagaatgaattgcgcatgcttcttaggaaatcctaa
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