KEGG   Plasmodium knowlesi: PKNH_0833800
Entry
PKNH_0833800      CDS       T01094                                 
Name
(RefSeq) splicing factor 3B subunit 1, putative
  KO
K12828  splicing factor 3B subunit 1
Organism
pkn  Plasmodium knowlesi
Pathway
pkn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pkn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PKNH_0833800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pkn03041]
    PKNH_0833800
   03036 Chromosome and associated proteins [BR:pkn03036]
    PKNH_0833800
Spliceosome [BR:pkn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PKNH_0833800
 Complex B
    PKNH_0833800
 Complex C
   U2 SnRNP specific factors
    PKNH_0833800
Chromosome and associated proteins [BR:pkn03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    PKNH_0833800
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N Htt_N-HEAT_1 HMD
Other DBs
NCBI-GeneID: 7320304
NCBI-ProteinID: XP_002258957
UniProt: A0A5K1VT35 A0A384KT74
LinkDB
Position
8:1541571..1545593
AA seq 1340 aa
MGAKRSEYDAEKWEEGKKHKYGKEEMNGGGQLSGNVEYDLEIETRLEDEDSANHVGNGPM
DTLRRNHNHISIDTLKEEVVQNDFNNDDLDDKTLGLVKDKSIKRRENEFQRRKYDYVMSP
GRADPFGEKSPSPGERTYADVMMDINNESYKMKLSSGGTKAGAKDIGGGGNRKMRWGVTE
GDVNGREPGESSTSNKANEMMKKEQGKSKWGALSEEENKSMSFGNMPTPAPSKWVDTPFV
LNDGGAVKKKKISRWDKVGDGNTTSGADNLAQADMMKTPKVVAPGGLVGTGGATPGGMMK
TPYLMPGSGNFVNTPYVLNQLGKTPTMLTPMTPGMTSVSIDSIIKMKIKNEMEMRNRPLT
DEDLDELLPSEGYEIVQPPEEYEAIRRNKLKVFFKTMATTVGTPLLMGSAAIGRVTTSVE
DDKTGDHHSAGVMQTPYSNNNMMNSTLISGTMPSGTPFYEIPSTTTNQMKDTEGGDAQTI
LQSSQFQINNPQLLSELKYVQLKNEDFIYFNKLFETVDESDLSQEELKERKLMILLLKIK
NGTPSVRRAALRAITDKVKELGPETLFNLILPLMMQNTLEDQERHLLVKVIDRILFKLDD
LVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMIGIMRPDIDHPDEYVR
NTTARAFAVVASALGIPSLILFLKAVCQSKKNWEARHTGIKIVQQIAILMGCAVLPHLRQ
LVSIVAHGLHDEQQKVKTITALAIAALAEAAAPYGIEAFDSVLRPLWKGIAEHRGKVLGA
FLKAIGLIIPLMDPYHASYYTREVMVILINEFNSPDEEMKKVVLKCVKQCIQTEGIEKDY
INEEVVNPFFEKFWVLRSSHDKRNLHLIVETTVEISNKIGGAAVIARIVDDLKDPSEQFR
KMVMQTIQSIVNNQGVDDIDQTLEEQLIDGILYAFQEQASEDYYILLNSFDAIVNKLQVR
MKPYLPQIAGIIRWRLNTPLPKIRQQSAELISRIANLMHLCGEHQMLGHLALYLYEYLGE
EYPEVLGNIIGALKSIVVVLGVQHMTPPIKDLLPRITPILKNRHEKVQENVIDLIGIIAD
KGGDLVSPKEWDRICFDLIELLKSNKKLIRRATIQTFGYIARTIGPFEVLTVLLNNLRVQ
ERQLRVCTTVAIAIVADTCLPYSVLAALMNEYRTQDLNVQNGVLKALSFMFEYIGEIAKD
YVYAVVPLLEHALMDRDLVHRQIATWACKHLALGCFGLNREDALIHLLNYVWPNIFETSP
HLIQAVIDSIDGFRVALGPAIIFQYLVQGIFHPSRKVREIYWKIYNNVYIGHQDSLVPIY
PPFEHLDDSNFARDELRYTL
NT seq 4023 nt   +upstreamnt  +downstreamnt
atgggggcgaagcggagtgagtacgatgcggagaaatgggaagaggggaagaagcacaag
tacggcaaggaggaaatgaacggagggggccagctatcgggaaatgttgaatacgacctg
gagatagagacccggctggaggatgaggactcagccaaccacgtaggaaatggcccaatg
gacacactcagacggaaccacaatcacataagcatagataccctaaaagaagaagtagtc
cagaacgacttcaataatgatgatctagatgacaaaacgctaggattggtaaaagacaaa
tccatcaaaagaagagaaaatgaatttcagaggaggaagtatgattatgttatgtctccg
gggagagctgatccgtttggagagaagagcccatccccaggggagagaacgtacgcagat
gtgatgatggatataaataatgagagttacaaaatgaagctttccagtggtggtaccaag
gcgggtgcaaaggatatcggaggagggggcaatagaaagatgcggtggggtgtcacagaa
ggtgatgttaacgggagagaaccgggggagtcatctacatccaataaagcaaatgaaatg
atgaaaaaagaacaaggaaaaagtaagtggggggccttatccgaagaggagaacaaatcc
atgagctttggtaatatgcctacacctgcaccgtctaagtgggttgacacgccctttgta
ctgaacgacgggggtgcagtaaagaagaaaaaaatttcgagatgggacaaagtcggggat
gggaatactacgtcaggggcagataatctcgcgcaagctgacatgatgaaaacgccaaag
gtggtggcacctggtggattagtaggaactggcggggccacccccggaggtatgatgaaa
acaccatatctcatgcccggaagcggaaatttcgtaaacacgccatatgtgttgaaccaa
ttaggtaaaactcctacaatgctcacaccaatgaccccaggaatgacatcggtatccatt
gactcgataataaaaatgaaaataaagaatgaaatggagatgcgaaataggccattaaca
gatgaagacctggatgaactacttccctccgaagggtatgaaatagtgcaacctccagaa
gaatatgaggctataagaaggaataaattgaaagtattttttaagacaatggcaactacg
gtgggaactccccttctgatgggtagtgcagccattggaagagttaccacttctgtggag
gatgacaaaacaggtgatcatcactcggcgggagtgatgcagacaccttattcaaataac
aacatgatgaatagcacactgattagtggaacgatgccaagtggcacgcccttttacgaa
atcccaagcaccaccacaaatcagatgaaggacacagagggaggagatgcacagacgatc
ctacagagtagccagttccaaataaacaaccctcaattattaagcgagttaaaatatgta
caattaaaaaatgaagattttatctatttcaacaaattatttgaaacggttgatgaaagt
gatttatcacaggaggagttgaaggaaagaaaactaatgatccttctacttaagattaag
aatggaactccttctgttagaagagcggctttaagggctatcacagataaggtgaaggag
ctaggtccagaaactcttttcaatttaattctacccttgatgatgcagaacacgttggag
gatcaggagagacaccttttggtgaaagttatcgaccgaatacttttcaagttagatgat
ttagtcagaccatatgtacataaaatattggtcgtcattgagcctttactaatagacgag
gattattatgcgagagtagaaggaagagaaataataagtaacttagctaaagctgcaggt
ttagctactatgattggtattatgagaccagatatagatcatccagatgagtatgtgagg
aatactacagccagagcatttgccgttgttgcatctgcacttggtattccatcattgatt
ctgtttttgaaagctgtttgtcaatcgaaaaaaaattgggaagctcgacatacaggaatt
aaaattgttcagcagattgctattcttatgggttgtgcggttttgccgcatctgagacaa
ctggtttcgattgtggcacatgggttgcatgatgaacaacagaaggtaaaaacgatcact
gcacttgctatagccgcattagcagaggctgcggcaccttatggaatcgaagcatttgat
tctgttttgcgacccctatggaaaggaattgctgaacatagaggaaaagtgctaggtgcg
tttttgaaagctatcggattaattatccctttaatggatccatatcatgcaagttactat
acaagggaagtgatggttatccttattaatgagttcaattctccagatgaagaaatgaaa
aaggttgttttgaaatgtgtgaagcagtgtatacagacggagggtattgaaaaagattac
attaacgaagaagtggtgaacccattttttgagaaattttgggttctaagaagtagtcat
gataagaggaatctacatctgatagtggaaacgacagtcgaaatttcaaacaaaatagga
ggagcagctgtcattgccagaatcgtggatgacttgaaggatccatctgaacagttcaga
aaaatggttatgcaaactatacagagcattgttaataatcagggggtagacgatatagat
caaacattagaggagcaactcatcgatggaattctctatgcttttcaggagcaagcttca
gaggattattacatccttctcaattccttcgatgcgattgtaaataaattgcaagttcga
atgaagccctacttgccacaaatagcaggaataatcagatggagactcaatacaccattg
ccgaagattaggcaacaaagtgctgaactcatttcccgaattgcaaatctaatgcatcta
tgtggagaacaccaaatgttgggtcatctggctttgtatttgtatgaatacttgggggag
gaatatcccgaagttttaggaaatataatcggtgcgttaaaatctattgttgttgtttta
ggtgtacagcacatgactccaccgataaaggatctgctaccaagaataactccgattttg
aaaaatagacatgagaaggtacaagaaaatgtaatcgacctcattggaattattgcagac
aagggaggagacttggtctccccaaaggagtgggatcgtatttgtttcgacttaattgaa
ttgttaaagtcgaataaaaaattaattaggagagcaacaatccaaacttttggatatata
gccagaacgattggaccatttgaagttttaacggttctattaaataacttaagggttcag
gaaagacaactgagagtgtgtaccacggttgccattgcgatagtagcagatacgtgcctg
ccctattcggtgctagcagcactaatgaatgaatatcgaacccaggatctcaacgtacag
aatggagtgttaaaagctctatccttcatgtttgaatatattggtgaaattgcaaaggat
tatgtgtacgcagtagtacctctgctcgagcatgctctcatggatagagatttagttcac
agacaaattgcaacgtgggcatgcaagcacttagctcttggttgctttggactgaacaga
gaagatgcactcatccatttgttaaactacgtgtggccaaatatatttgagacttctcca
catctgattcaggcagtcattgattctattgatggctttagggtggccctggggcctgct
atcatcttccagtatctagtgcagggtatatttcacccctctagaaaggtacgcgaaatt
tattggaaaatctacaacaacgtttatatcggccaccaggatagtctcgtccccatctac
cccccgtttgagcatctcgatgatagcaacttcgcacgcgacgagcttcgctatacgttg
tga

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