Plasmodium knowlesi: PKNH_1011200
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Entry
PKNH_1011200 CDS
T01094
Name
(RefSeq) ATP-dependent RNA helicase DDX1, putative
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pkn
Plasmodium knowlesi
Brite
KEGG Orthology (KO) [BR:
pkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkn03041
]
PKNH_1011200
03016 Transfer RNA biogenesis [BR:
pkn03016
]
PKNH_1011200
Enzymes [BR:
pkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PKNH_1011200
Spliceosome [BR:
pkn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PKNH_1011200
Transfer RNA biogenesis [BR:
pkn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PKNH_1011200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
SNF2-rel_dom
DUF4840
Motif
Other DBs
NCBI-GeneID:
7321201
NCBI-ProteinID:
XP_002259594
UniProt:
A0A5K1VBB3
A0A384K9M6
LinkDB
All DBs
Position
10:complement(<516549..>518999)
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AA seq
816 aa
AA seq
DB search
MSAFEELGLHSNLCELLEKNGIDLPTAIQQESIPLILGGGDVCASAETGTGKTLSFIVSS
LQIVHELFRNIGTYESSNSSVAPCVNTRRDNDNGEFSSEVKKGGLLLKFLSGNNSRITLN
NAVGECICNGEYSSSFEEVKVGCEIRSGMYAYEIEVLGRCFLNVGFCPSVKETLKYNYTY
CSNGSKYTNGREENYGDVFSTSDIITCLINKNNNVISFKKNGKFLGNAFKIFYKYNDLPF
FPYICGKYFHVKFHFSNLKYADASYKELNELMGSGQEDNSFTRKVYYGGDPEEDKTASNF
QIKQMQSSGHSGAKGVLESGKVDAANRTKLYCIVLCPTRDLAMQTYNNYLIYAESFRSSS
INIGLLVGGEQPNRDKRNHQQHSNILVCTCFKLMECIKKNTICLNDVRLLILDEADELIN
NDEKSVLQIKDISMKQSQHVQTCFYSATLQDQNVKDCINKITNKPIFVDLKYGKNSIPSH
IYVCVYYVNNKNTNFSYSEENKKEKMYDDIIYNEKLHAMSYEMVYEYTDKVHLLNCGKNE
KEKISLDIKINKLKKLIHIINVFNMQNGIIFCRTNLDCDNVYNFLNHLGDGKAYKGTVET
MKENKYSCVILKGKMSNTERKNNLDAFRKGEVRFLICTDVAARGIDIQNLRYLIIMTLSD
NINSFFHKIGRVGRDGKNSLCIVLSAESEEEKVWFHTCPSRGVNCYNRNLKDNKGCTVYI
KEGDYIQTINNMLETPMHVLDSKYYYAENVVDPLNYIKNNPVSNKSRRNKSQSGNTIFSE
PLHTDVIGCFGPSIENIKKLQSDICCRYYESAKFSL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccttcgaggaactaggtttgcacagcaacttgtgcgaactgctagaaaaaaac
ggaatagatttaccaaccgctattcagcaggagtccattccactaattttagggggggga
gatgtatgtgcatcagctgagacagggacaggtaaaacgctaagttttattgtctcctct
ttgcaaatagtgcacgaattgtttaggaatataggaacgtacgaatcgagcaattctagc
gtagctccatgtgtcaacaccaggagagataacgataatggtgaattctccagtgaagta
aaaaaaggggggttacttctaaaattcctaagcggtaacaattcgagaatcaccctgaac
aatgcagttggagaatgcatatgcaatggtgaatactctagttcattcgaagaagtcaaa
gtgggatgcgaaataaggagtggaatgtacgcctacgaaattgaagttctaggaaggtgc
ttcttgaacgttggattttgcccctcagtaaaggaaacgctaaaatataactacacctat
tgcagtaatgggagcaagtacaccaatggaagggaagaaaattatggagacgtcttttca
accagtgatataataacttgcttgataaataaaaacaacaacgtaatttcttttaaaaaa
aatgggaagtttttgggaaatgcttttaaaatattttacaagtataatgatcttcctttt
ttcccctatatatgtgggaaatattttcacgtgaagtttcatttttcaaatttgaagtac
gccgatgcatcctacaaagagttgaatgaacttatgggctcaggccaggaagacaactcc
tttacgaggaaagtgtactacggtggagacccagaggaggataaaacagcgtcgaacttc
cagataaagcagatgcaaagcagtggccactctggtgctaaaggtgttttggaaagcggc
aaggtggacgcagccaataggaccaagttgtactgcatcgttctctgccctactagggac
ctagccatgcagacgtataataattacctgatttatgcggagagtttcagaagctcgtcc
ataaatatcgggctcctagtaggaggggaacaacctaacagggacaaacgaaatcatcag
caacacagcaacatcctcgtatgcacttgtttcaaacttatggaatgtataaagaaaaat
acaatatgcttgaacgatgtaagattacttattttagacgaagcagacgaacttatcaat
aatgatgagaaatccgttttgcaaattaaggatataagtatgaagcagagtcagcatgta
cagacctgcttctactctgccacgttacaggaccaaaacgtaaaggattgtattaacaaa
attacgaacaaaccaattttcgtagatttgaaatatgggaaaaatagcatcccctcacac
atatatgtttgcgtctactacgttaacaataaaaatacaaacttctcatactccgaagaa
aacaagaaggaaaaaatgtatgatgatataatttacaacgaaaagctacacgcaatgagc
tacgaaatggtttatgaatatacagacaaagtacacttactcaattgtgggaaaaatgaa
aaggagaaaatctccctggatattaaaattaacaaattgaaaaaattaattcatataatt
aatgtttttaacatgcaaaatggaataattttttgtcgaacaaatttagactgcgataat
gtatataattttttaaaccaccttggagatggaaaagcttacaaaggcacagtcgaaact
atgaaagaaaataaatactcctgtgtcattttgaagggaaaaatgtccaacacggaaagg
aagaataatcttgacgcatttagaaaaggagaagtgcgattcttaatatgtacggatgtg
gctgcgagaggtattgatatacaaaatttaagatacttaataattatgaccctgtctgat
aatataaattcattttttcacaaaattgggagagtaggaagagatgggaaaaacagctta
tgcattgttttaagtgcagagtctgaggaagagaaagtgtggtttcatacctgtcctagt
aggggcgtgaactgctacaacagaaatttgaaagacaacaaaggatgcacagtctacatt
aaagaaggtgattatattcagacaatcaacaacatgctggaaacgcccatgcatgtactt
gactctaagtactactatgcagagaatgtggtggatccactaaattacatcaaaaataac
cccgtttcgaacaaaagcagaaggaacaaaagtcagagcggcaacaccattttctcggaa
cctctccacaccgacgtgatagggtgcttcggcccaagtattgaaaatatcaaaaagttg
cagagcgacatctgttgcaggtattatgaatcggccaagttttctttgtaa
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